Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02041 AGATTGGCGGATTACATAGGTTTGCCATGTCGAATTGCTCGAGGTTGTCGGTACTGTGCTTCAGATCATAGATCGTCTTGCCTTGTCAAGATTAAAGATGACAGACAGCTCTCAAGGGAATATGTAGTTGACCTGGTTGGGGAACCTGGAAATATCCATGGGCCGGATTCATCTATTAATGGAGCATATGTGTCTTCAATACCTTCTCCTTTTCAAATTTCTCATTTGAAAGAATGCCAATCGCCATATGTGGATGTTGCAGCATGTTCTCAATCTCTTGGTAACACTTATTTAGGTGTTGTAAGGGAAGATCAACAAGCTGAAGAAATTGATCTGCAGAAAAATAATAATGGCTCTATTTATCCTGCAATAGATCAAACTCATGGAGGTGCAGAACCACCTCTAATTCCTTTTGGCTTGAAAGGGAATGACAAGGAATGTGCGATCCTAGGTTTATTAAATTTTCCTCCAGTATATGAAGGTGTTTCTAAGGATCTTCACCCAGCCACTAAAGCGTCATTACATGAATACCCCAGGCTCAGTAAAGATTCAGTTGTAGTACTAGAAGCTTCCAACAAAGAGATAGAGATCATTGTAAAAGGAAGTTCTGGGGTAAAAAGTAACTATAGGCAATCCACACTGAGCTCATCCAGTCAATCAAAACAGGAACAAGAGCAAGTAAAAATTAAAGTTGAAAATCAGGGTGCTAGTAATATTCCAAGATACTTGAATCTTGAACCATCACTTGCAATGGATTGGCTTGAGATACCATGGGATGATTTACGAATCAAAGAGCGTGTTGGTGCTGGATCCTTTGGGACAGTGTATCGTGCTGAATGGCATGGATCAgatgttgctatcaaggttttaacagttcaggatttccaagatgatcaattgaaagagtttctaagAGAGGTTGCAATAATGAAACGAGTACGTCATCCAAATGTGGTGTTGTTCATGGGTGCAGTTACTAAACGTCCCCATCTATCTATAGTAACAGAATATTTGCCTAGTTTATTTCGCCTAATACATAAGCCAGCATCTGGTGAGATTCTAGATCCAAGGAGAAGATTACGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTCCACTGTCTAAAGCCTCCAATTGTGCACTGGGATCTCAAAACCCCAAATCTGTTGGTGGACAGAAATTGGACTGTAAAGGTCTGTGATTTTGGATTGTCCAGATTTAAGGCAAACACTTTCTTATCATCAAAATCCGTTGCTGGAACACCTGAGTGGATGGCTCCAGAAATTCTTCGAGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGGATTATCCTGTGGGAACTTGTGACTCTGCAACAACCATGGAATGGACTTAATCATGCCCAGGTGGTTGGAGCTGTCGCTTTCCAGAACAGGAGACTTGCTATCCCTCCAAACATCTCCCCAGCATTGGCCTCCCTCATGGAATCTTGTTGGGCCGATAACCCTGCTGATCGTCCATCTTTTGGTAGCATAGTTGAGTCGTTAAAGAAGCTACTGAAGTCACCAGCAGATGCAATAAAAATGGaggttactattattaactccattctcggctttcttcgaagcgttgagctaagggacttgaggactgaagacagaatcactCTGTGGTTAGAGAAGATTGGTGCTATTGAACCTTTCTCTGGAAACCTTGCCACCTGTTGGAGCAATATCAAAGAGGAGGATGCACTTGAAAGATACAAACTGATAACTGGAAATACCGTGCGTTTTCCTGAATTTCAGGTCTATGATGCACACCCAGAAGACAGCTGGCTAGCTGCTTCACCTGATGGCGTTATTGACAGTATGGTGCATGAGTTGCCTTCTTGTGGAGTACTGGAGATAAAGTGTCCATATTTTGATGGGGACATAAGTAAAGCTTTTCCTTGGTTTCGAATTCCAATTCACTATATTCCTCAAACTCAGGGTTTAATGGAGATTCTAGGAAGGGATTGGATGGATTTTTATGTTTGGACTCCTAATGGTAGTAGTCTATTCAGGATATACCGCGATGCCGAGTATTGGGATTTAATGAAAATAGCACTATCTGATTTCTGGTGGAAGCATGAGAGTTTGGCAACAAGTATACCTGTTATGGAGGATTCAGAGCAAAGGAAGAAAAGGCTGAAACAAATGCGTGTGCAAGCTGACCAAGCTGAAGTTTCTGGTGGCAGGGAAGGTTCTGTGGTGCCCGGTTTTCTCTCAAATCCCCTGATTGAAGCTCCTTCAACTATGCCATCACGGGATACATCATATGCTGCTCCAAGGTTTGACTATTATACTGATCCAATGAGTGCCTTCTCATCTAAAAGGAACAATGCCAGTACCCAGGCTGCACCGGATAATTTCCCTCCTTCAAAATTTGGTGGTCCTCCTATGGCACAATATTCATCACCACATCCAGAATCAAAAAATCCACAGATGACTCCACATCCCATTCAAGCATCGCCAGCAGCATATAGAAACCCAGTTTGGAGTGGACCTGGTGGTCCTGCTCACTATAACTTTCCGTTACATCCATCAAGTGGTGGTACTTATCCAAGTCCTAGATTTGAACCATCGGGTGGTCCATTATATAACACTGCCCAGGGCATAGCTCACCAgcccagttacagtcctaatcctccttatccaggatacgtgaacagtcctaggcccagttacagtcctaatccctctccaggatacagtaactgccctaggcccagttacagtcccaatccttctccaggatacaggaacagtcctagCCCTGGTCAAGGGCGAGGCAGGGGTTTCTGGCGCAACACGGGAAGCCCTGTTTCAGGATGGGGTAGTGGACAAGGACCGAATTTTCATGGTCATCGGTCCAACGAAAACACAGTTCATGGTCCAGACCGATTTTACAAGAGGTCCATGGTTGAAGATCCATGGGAGCATTTAGAACCTATTATATGGAAGGCAAATGATGGATATTTAAACACTTCACGTGTACCTCTGAATTCACAACCCTGGATTTCAAAAGCAACAAGTACAAAAGGGGAGGGATCATCTGCTGCTTCTGTCAAGTCCAGTTCCGAACCAAGCCTTGCTGAGTACTTGGCTTCTGCATTCAATGAAGCTGCCAATGATGCAGAAAATGTATGA 3180 0.3921 RLADYIGLPCRIARGCRYCASDHRSSCLVKIKDDRQLSREYVVDLVGEPGNIHGPDSSINGAYVSSIPSPFQISHLKECQSPYVDVAACSQSLGNTYLGVVREDQQAEEIDLQKNNNGSIYPAIDQTHGGAEPPLIPFGLKGNDKECAILGLLNFPPVYEGVSKDLHPATKASLHEYPRLSKDSVVVLEASNKEIEIIVKGSSGVKSNYRQSTLSSSSQSKQEQEQVKIKVENQGASNIPRYLNLEPSLAMDWLEIPWDDLRIKERVGAGSFGTVYRAEWHGSDVAIKVLTVQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPSLFRLIHKPASGEILDPRRRLRMALDVAKGINYLHCLKPPIVHWDLKTPNLLVDRNWTVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEILRGEPSNEKSDVYSFGIILWELVTLQQPWNGLNHAQVVGAVAFQNRRLAIPPNISPALASLMESCWADNPADRPSFGSIVESLKKLLKSPADAIKMEVTIINSILGFLRSVELRDLRTEDRITLWLEKIGAIEPFSGNLATCWSNIKEEDALERYKLITGNTVRFPEFQVYDAHPEDSWLAASPDGVIDSMVHELPSCGVLEIKCPYFDGDISKAFPWFRIPIHYIPQTQGLMEILGRDWMDFYVWTPNGSSLFRIYRDAEYWDLMKIALSDFWWKHESLATSIPVMEDSEQRKKRLKQMRVQADQAEVSGGREGSVVPGFLSNPLIEAPSTMPSRDTSYAAPRFDYYTDPMSAFSSKRNNASTQAAPDNFPPSKFGGPPMAQYSSPHPESKNPQMTPHPIQASPAAYRNPVWSGPGGPAHYNFPLHPSSGGTYPSPRFEPSGGPLYNTAQGIAHQPSYSPNPPYPGYVNSPRPSYSPNPSPGYSNCPRPSYSPNPSPGYRNSPSPGQGRGRGFWRNTGSPVSGWGSGQGPNFHGHRSNENTVHGPDRFYKRSMVEDPWEHLEPIIWKANDGYLNTSRVPLNSQPWISKATSTKGEGSSAASVKSSSEPSLAEYLASAFNEAANDAENV 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02041 1059 SMART serkin_6 261 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02041 1059 Gene3D - 531 724 IPR011604 -
Gma02g02041 1059 Pfam M-phase-specific PLK1-interacting protein 957 998 IPR028265 -
Gma02g02041 1059 MobiDBLite consensus disorder prediction 786 842 - -
Gma02g02041 1059 CDD STKc_MAP3K-like 267 513 - -
Gma02g02041 1059 ProSiteProfiles Protein kinase domain profile. 261 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02041 1059 MobiDBLite consensus disorder prediction 1018 1037 - -
Gma02g02041 1059 SUPERFAMILY Protein kinase-like (PK-like) 237 512 IPR011009 -
Gma02g02041 1059 ProSitePatterns Protein kinases ATP-binding region signature. 267 288 IPR017441 GO:0005524
Gma02g02041 1059 Coils Coil 717 737 - -
Gma02g02041 1059 Pfam Protein tyrosine and serine/threonine kinase 261 513 IPR001245 GO:0004672|GO:0006468
Gma02g02041 1059 Gene3D Phosphorylase Kinase; domain 1 254 338 - -
Gma02g02041 1059 MobiDBLite consensus disorder prediction 816 830 - -
Gma02g02041 1059 MobiDBLite consensus disorder prediction 889 931 - -
Gma02g02041 1059 Gene3D Transferase(Phosphotransferase) domain 1 340 526 - -
Gma02g02041 1059 SUPERFAMILY Restriction endonuclease-like 545 712 IPR011335 -
Gma02g02041 1059 MobiDBLite consensus disorder prediction 950 969 - -
Gma02g02041 1059 Pfam YqaJ-like viral recombinase domain 547 665 IPR019080 -
Gma02g02041 1059 Pfam Ethylene-responsive protein kinase Le-CTR1 2 52 - -
Gma02g02041 1059 MobiDBLite consensus disorder prediction 854 976 - -
Gma02g02041 1059 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 527 - -
Gma02g02041 1059 ProSitePatterns Serine/Threonine protein kinases active-site signature. 380 392 IPR008271 GO:0004672|GO:0006468
Gma02g02041 1059 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 527 - -
Gma02g02041 1059 MobiDBLite consensus disorder prediction 786 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02041 Gma-Chr2 45984216 45999799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02041 1 526 MAP Kinase Kinase Kinase AT4G24480 60.261 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gma02g02041 PK_Tyr_Ser-Thr 8.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02041 - - gmx:100786546 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02041 02 45984216 45999799 Gma02g02041 02 45984216 45999799 ECH