Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02040 ATGAGCGAAGAAGAGAACAAGGGTTGTGCTTTTCTGGGaaccaactccacctactcagGTTTTCTTCTTGACCCTTCAAAATGTGATATGCTGAGTTTGCCAGACAAGCAAAGACTAGTCCATGAGATTGCTCGACAGTCAAAAGATGCCTCAAGTATGCTTCAGTCATTTACACGTAGGGAACTTCTAGAAATAATCTGTGCTGAATTAGGCAAAGAGAGGAAGTACACAGGATATACCAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAGAACTCCAACTTGCACATCAATGGAAATACACCTCCTCAATCTCCTGCCAAAAGTTGCATTGGAACTAAAAGGAAAAAGAAACCTGCGACTCAGGATTTACATCATGCTCCTCTAGGGAACAGTAAAGAAACAGTGAAAACCTTTTTGTGTCAAAATGTTGCTTGCAAAGCTAAATTGAATCCAGAAGATTCTTTTTGCAAGAGATGTTCTTGTTGTATATGTCATCATTATGATGATAACAAGGATCCTAGTTTGTGGTTGACCTGCAGCTCTGATCTTCCCAATGAGGAGTCATGTGGAATGTCCTGTCATTTGCAATGTGCTTTGAGTAATCAAATGTCTGGCATTTTGAAGGGTAGTTGTGGTGGTGTTAAGTTGGATGGAACCTTCTGTTGTGTTTCCTGTGGAAAAATTAATGAACTAATGAAGACATGGCGAAAGCAATTGTTGGTTGCCAAAGAAGCAAGAAGAACGGATATACTCTCTTTGCGATTATCCCTGGCCCACAGAATTCTTTTAGGAACAGAAGTCTACAAGGAAGTGCAGAAAATTGTAGAAACTGCTCTCAAATTACTGGAGAATGAAGTGGGATCACTATATGCTAGTATGACGCGTGGAATTGTGAGCAGGCTTTCATGTGGTGCTGAGGTTCAGAGATTGTGCACTACTGCACTTGAATGTTTTGATTCAAAGTTTTCTGTCCTTTTCTCTATTTGTTTGGAAAACAAAGATGCACCAACTTGCTCAATTCGTTTTGAAGAGTGTCTTCCTACATCAGTGGTTATTGTGCTAGAGTACAAAGACAAACTTTTGCAGAACTTTCTAGGCTGCAGGCTTTGGCACCGACTATCAACAATGGACTACCCTGAACAACCCACCTTCATTGTCTTGAGGCCTGAGAAAAGATTCAAGTTAGAAAACCTCCATCCTTCAACTGAATACTTTTGCAAGGCTTCTCTGTTCAGCAGCACAGGGATTTTGGGTGCTGCAGAAGCTACATGGGTGACACCTTGTGAACCAACTAATCCTTCAAAAGTTATTAATTGTGGTGGGAATAGATTTAGATGGTCCCCTCAAAGACCCTCAGGTACAGGAGTGAACATGTGTGCACAGAACCGAATAACTGCTGAAATTCATCCCACAGAATCTGCCAACTCCGAAATGAAGTTATCATCCGGAGAACATCCCGGGAAGAAACACATCATTTTGAACATCAGGAGCAGGTTTGAAGAGTTCCTCTCCAAGCCTCAACCAGTAGAGCCTTTTTCATATAAAAATCTTGCTGCAGTTTCACCTTCAACACCTTCTAAATCCTATGAAATGAGGCAAATTCCTGGCTTGAATTCTAGGAAGTTCTCGAAGGAGAACGATTATGAGTATTCCGTCAGGGTAGTCAAATGGTTAGAGCATCAAGGGCATATAGATGAAATCTTCAGAGTAAGGTTTCTCACTTGGTTCAGCCTCAAGGCTACTCAGCAGGAGAGAAGGGTGGTTAGTGCTTTTGTTGATGCATTGATTGATGACCCAGCAAGCTTAGCAGACCAGCTCATACACACTTTCAGCGACGAGATATGTTGCGAGCCAAAATCTTAG 1875 0.4091 MSEEENKGCAFLGTNSTYSGFLLDPSKCDMLSLPDKQRLVHEIARQSKDASSMLQSFTRRELLEIICAELGKERKYTGYTKSQMIEHLLKIISKNSNLHINGNTPPQSPAKSCIGTKRKKKPATQDLHHAPLGNSKETVKTFLCQNVACKAKLNPEDSFCKRCSCCICHHYDDNKDPSLWLTCSSDLPNEESCGMSCHLQCALSNQMSGILKGSCGGVKLDGTFCCVSCGKINELMKTWRKQLLVAKEARRTDILSLRLSLAHRILLGTEVYKEVQKIVETALKLLENEVGSLYASMTRGIVSRLSCGAEVQRLCTTALECFDSKFSVLFSICLENKDAPTCSIRFEECLPTSVVIVLEYKDKLLQNFLGCRLWHRLSTMDYPEQPTFIVLRPEKRFKLENLHPSTEYFCKASLFSSTGILGAAEATWVTPCEPTNPSKVINCGGNRFRWSPQRPSGTGVNMCAQNRITAEIHPTESANSEMKLSSGEHPGKKHIILNIRSRFEEFLSKPQPVEPFSYKNLAAVSPSTPSKSYEMRQIPGLNSRKFSKENDYEYSVRVVKWLEHQGHIDEIFRVRFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFSDEICCEPKS 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02040 624 CDD PHD_VIN3_plant 164 229 - -
Gma02g02040 624 PANTHER VIN3-LIKE PROTEIN 2-RELATED 14 623 IPR044514 GO:0010048|GO:0040029
Gma02g02040 624 PANTHER OS08G0220600 PROTEIN 14 623 - -
Gma02g02040 624 Pfam PHD - plant homeodomain finger protein 144 264 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02040 Gma-Chr2 45977318 45981989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02040 23 618 PHD Gene Family AT5G57380 32.848 6.87e-100 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02040 - - gmx:100820128 1280.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02040 02 45977318 45981989 Gma02g02040 02 45977318 45981989 ECH
Gma14g01817 14 48608652 48613309 Gma02g02040 02 45977318 45981989 GST