Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02032 ATGACATACTACTACATGGGTGATGCAACTTCTTTCAACCCATTCCAAGCTCTCACATTCCTCATTCTCATAACCACCCCTTTCATCCTCGGTGACGACGGCACCGCCGCCACGTCATCATCCCCGGTTATCTCAACCGGTCCCTATTCCTATTCGGACCCCTTCAATCTAAGCATGGGCGTTATATTGGCCGTGTTAATCACCACGTTCTGTCTCACCTTCCTTTTCCTCATCTACATCAAGCACTGCTACGACACCAACACCAACACATTAAAGCTTACCACGAACTCCCGGCCTTCGCACGTGCGGAAGAACTCCGGCATTGACCGTGATGTTCTGGAATCTTTGCCGGTTTTTAGGTTTGGGTCGCTGAGGGGGCAAAAGAACGGTCTTGATTGCGCGGTCTGTGTCGCCAGGTTTGAGGATCCTGAGGTTTTGAGGCTGTTGCCCAAATGCAAGCACGCGTTCCACGTGGCTCGACGCATACTCCACGTGCCCGCTCTGCCGCTACAAGGTCGAGCCGGACGACGTCGTTGTTTTCGTGAAAGACGACGACGCCAGAGCGAAATCTCCAGAGGGAGAATTGGACGTCGATCGAAAGAGGCCAAAACGACGTCGTCACGGGAGCAACGGCCTCGACGACTTCGTTGGACGGTGCGGAACACTGTTTTTGCTCCAACATGTGCAGAACACAAAATTTTTAGTCTTAGGTTAGAAATTACAGATGTCGTTGTGTTCTTTAACATACAAGAATGA 756 0.5119 MTYYYMGDATSFNPFQALTFLILITTPFILGDDGTAATSSSPVISTGPYSYSDPFNLSMGVILAVLITTFCLTFLFLIYIKHCYDTNTNTLKLTTNSRPSHVRKNSGIDRDVLESLPVFRFGSLRGQKNGLDCAVCVARFEDPEVLRLLPKCKHAFHVARRILHVPALPLQGRAGRRRCFRERRRRQSEISRGRIGRRSKEAKTTSSREQRPRRLRWTVRNTVFAPTCAEHKIFSLRLEITDVVVFFNIQE 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02032 251 MobiDBLite consensus disorder prediction 181 212 - -
Gma02g02032 251 SUPERFAMILY RING/U-box 113 158 - -
Gma02g02032 251 PANTHER RING-H2 FINGER PROTEIN ATL43 36 158 - -
Gma02g02032 251 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 36 158 - -
Gma02g02032 251 Pfam RING-like zinc finger 132 158 IPR001841 -
Gma02g02032 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 191 IPR013083 -
Gma02g02032 251 MobiDBLite consensus disorder prediction 184 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02032 Gma-Chr2 45901746 45902501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02032 49 159 C3H Transcription Factor Family AT2G20030 42.742 1.08e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02032 K19041 - aprc:113847776 164.081