Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02025 ATGTTCTCAAAGCTTCAGCCACAACACCAGCAACAGCATCAACCTTTTCAATTCTCTCGTGAATGTCAAACGTCCGAGGACGATGACAGCCGAAGCAGCGGTGGCCCTAACACCGCCGTCGCCCAAAAATCAGTTTTAGGCGGCGGAGGATGCAGCGATGGGGCCACAATTGAAGTGGTGCGGCGGCCCAGGGGCCGCCCGCCCGGGTCCAAGAACAGGCCCAAGCCGCCTCTCATAATAACGCGCGAGCCCGAGCCCGCCATGAGTCCGTTCATTCTAGAAATCCCGGGCGGAAGCGACGTCGTCGAAGCCCTAGCCCGGTTCAGCCGCAGAAAAAACACTGGCCTGTGCGTGTTAACCGGTTCGGGAACCGTCGCCAACGTCACTCTCCGTCAACCTTCTTTCTCTCCCGCCGGCGCCACCGTCGCCACCGTCACTTTCCACGGCCGCTTCGATATCCTCTCCATGTCCGCCACCTTCCTCCACCACGCCTCCCCGGCGGCGATCCCGAACGCCTTCGCCGTGTCCCTTTCCGGACCGCAGGGGCAGATCGTCGGCGGATTCGTCGCCGGCAGGCTCCTCGCGGCCGGCACGGTGTTCGTGATTGCCGCGTCGTTCAACAATCCGTCGTATCACCGGCTTTCGTCGGAGGAGGAGGCGCAGAACAACTCTGGCGGCGGCGCAGGAGACGCGCAGTCTCCGCCGGTTTCCGGTGGCGGCGTGGAGAGCGGACACGTTCCGGCTGAGTCGTTTATGTACAGCTGTCACCTTCCTTCGGATGTGATTTGGGCTCCAACCCCTAGACCACCTTTCTGA 816 0.6225 MFSKLQPQHQQQHQPFQFSRECQTSEDDDSRSSGGPNTAVAQKSVLGGGGCSDGATIEVVRRPRGRPPGSKNRPKPPLIITREPEPAMSPFILEIPGGSDVVEALARFSRRKNTGLCVLTGSGTVANVTLRQPSFSPAGATVATVTFHGRFDILSMSATFLHHASPAAIPNAFAVSLSGPQGQIVGGFVAGRLLAAGTVFVIAASFNNPSYHRLSSEEEAQNNSGGGAGDAQSPPVSGGGVESGHVPAESFMYSCHLPSDVIWAPTPRPPF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02025 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 8 269 - -
Gma02g02025 271 MobiDBLite consensus disorder prediction 213 244 - -
Gma02g02025 271 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 219 - -
Gma02g02025 271 CDD DUF296 90 206 IPR005175 -
Gma02g02025 271 MobiDBLite consensus disorder prediction 1 84 - -
Gma02g02025 271 Gene3D - 89 224 - -
Gma02g02025 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 269 IPR014476 GO:0003680
Gma02g02025 271 MobiDBLite consensus disorder prediction 1 21 - -
Gma02g02025 271 MobiDBLite consensus disorder prediction 213 230 - -
Gma02g02025 271 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 208 IPR005175 -
Gma02g02025 271 ProSiteProfiles PPC domain profile profile. 85 227 IPR005175 -
Gma02g02025 271 PIRSF ESCAROLA 1 259 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02025 Gma-Chr2 45828221 45829525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02025 53 270 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 62.882 3.57e-93 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02025 - - gmx:100811053 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02025 02 45828221 45829525 Gma02g02025 02 45828221 45829525 ECH
Gma14g01806 14 48475535 48476652 Gma02g02025 02 45828221 45829525 GST
Gma02g02025 02 45828221 45829525 Gma04g02141 04 51884871 51886211 PCT