Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02014 ATGGCACCCAGTTTTGATTGTGTTTCGAGCCTTCTCTGTGTGGAAGACAACAGTATTTTTGACGAAAACGATTATGGTGGTTCGGTGGAGGTGTTGGAGGACGCGTGGCAGGATCCTAGATATCGTCGAAACCTTAGTCAAAGTGAGAACTTGGATGTCCCAAATGGGTGGTTTCAGTTGCAGAGTGATGAGTGTTTGAGACTGATGGTTGAAAAGGAATGGGATCACTTGCCTAATGGTGATTATAGGAATAAGCTGAGGAGTGGGGATTTGGACTTTGAGGCCAGAAAAGAGGCCATTGATTGGATTCAAAAGGTTCAAGAGCACTTTGGTTTTGGACCTGTCTGTGCATATCTATCCATAAACTACTTGGACCGCTTCCTTTCTGCATATGAATTACCAAAGCATAGAACTTGGACAATGCAATTGTTGGCTGTTGGATGCTTATCTCTGGCAGCCAAAATGGAAGAGACTGATGCTCCTATGTCTCTTGATTTGCAGGTGGGTGAATCTAAGTATATATTTGAAGCCAAAACAATACAGAGAATGGAGCTTCTGGTGCTGAGCACATTGAGGTGGAGAATGCAGGCAATTACCCCATTTTCCTTCATTGACCATTTCCTTTACAAGATCAATGATGATCAAAGTCCAATTGGAGCTTCAATTTTGCAATCCATCCAGCTTATACTGAGTACTGTAAGAGGAATTGACTTCTTAGAGTTCAGACCCTCAGAGATTGCAGCAGCTGTGGCAATATCTGTGGTGGGGGAGGGCCAAACAGTGCAAACTGAGAAAGCAATTTCTGTTCTGATTCAGCTTGTGGAAAAGGAGAGGGTATTGAAGTGTGTTAAATTGATCCAAGAGCTGGCATCAAATAGTGGTGGTGGTTCTGCCAAGGGTGATAGTGCTTCTGTTTCTGTCCCTAGCGTGCCCCAGAGCCCAATAGGGGTGTTGAACACTGAATGCTTCAGCTACAAAAGTGATGACACAAATGCTGCTTCATGTGCAAATACTTCACATAACAATAGTCCAGATGCTAAAAGGAGGAAGCTAAACAAAACCTTTGGAGAATAG 1074 0.4348 MAPSFDCVSSLLCVEDNSIFDENDYGGSVEVLEDAWQDPRYRRNLSQSENLDVPNGWFQLQSDECLRLMVEKEWDHLPNGDYRNKLRSGDLDFEARKEAIDWIQKVQEHFGFGPVCAYLSINYLDRFLSAYELPKHRTWTMQLLAVGCLSLAAKMEETDAPMSLDLQVGESKYIFEAKTIQRMELLVLSTLRWRMQAITPFSFIDHFLYKINDDQSPIGASILQSIQLILSTVRGIDFLEFRPSEIAAAVAISVVGEGQTVQTEKAISVLIQLVEKERVLKCVKLIQELASNSGGGSAKGDSASVSVPSVPQSPIGVLNTECFSYKSDDTNAASCANTSHNNSPDAKRRKLNKTFGE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02014 357 SUPERFAMILY Cyclin-like 57 195 IPR036915 -
Gma02g02014 357 CDD CYCLIN 96 188 IPR013763 -
Gma02g02014 357 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 351 - -
Gma02g02014 357 Gene3D - 67 284 - -
Gma02g02014 357 Pfam Cyclin, C-terminal domain 198 295 IPR004367 -
Gma02g02014 357 Gene3D - 79 196 - -
Gma02g02014 357 MobiDBLite consensus disorder prediction 343 357 - -
Gma02g02014 357 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Gma02g02014 357 SMART Cyclin_C_2 198 324 IPR004367 -
Gma02g02014 357 SUPERFAMILY Cyclin-like 180 290 IPR036915 -
Gma02g02014 357 SMART cyclin_7 101 189 IPR013763 -
Gma02g02014 357 Pfam Cyclin, N-terminal domain 66 195 IPR006671 -
Gma02g02014 357 PANTHER CYCLINS 1 351 IPR039361 -
Gma02g02014 357 MobiDBLite consensus disorder prediction 333 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02014 Gma-Chr2 45674996 45677329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02014 66 336 Core Cell Cycle Gene Families AT2G22490 50.545 8.29e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02014 K18810 - gmx:100812660 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02014 02 45674996 45677329 Gma02g02014 02 45674996 45677329 ECH
Gma14g01796 14 48345104 48347949 Gma02g02014 02 45674996 45677329 GST