Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02013 ATGGGAGAAGATTGCAGAACCTGGATTCCGGAGCTGCATTTTAATTGGCAATCTCCAAATTTGAGCTCCTTCAATGCTACACCCTTTGGTGTGGGGAGGCAAAATGGTACTTCTGCAGCTATGAATTCGGGTGCCAACGTGGTCACAAGAAACTCGGCAATGCCAGCTTATGCGTCCTCTGCCTTACCGCATTCGCAGTTAGGACATTCTGGTGAACCTCATGGTTGGTTTTATTGTTTGCCTCGCTTTCGCCAGGGATTTACCACGCCTGCTCAAACCTTCAATGCAGAGGAAAAACTCCCTGCTGGCCATGCCAATGGTTTAGGGGTGGAAGTTGCACCGAATAGGGAATCGGGTTTCCCTCAGAAGCAATTGCTGGTTATTGATCAAACGGGTGATCAAACAACTCTTGTTTATAGTTCAAGGTTTGGGGGTCCCGTTGATTGTCATGTGTCCTGGGATTCAAAGCTGCATGGTTCTATCAATTTGAACAATGGGAATGAATTGCTTAATTTAAGGAGAGATGTGAATCATGTGGTTGGACTTGGACCTACTTTGGATGATAAAGTTCATGAAAATACAGGAACTGATGATGACATTGAAAGCGAGATGCATGAGGACACAGAGGAAATCAATGCATTGCTTTACTCTGACAGTGATGGTTATTCCACTGAGGATGATGATGATGATGAAGTTACTAGCACAGGACATTCACCCAGTACAATGACCACGCACGATGATAACCAGGAAGAACCCCATAGGAGAACCGCTGAAGAAGTTGCTAGCTCCGTCGGAGAAACAAAGAAGCGAAAGCTATTGGACGGTGCTTATGATGATGACAACTTGCAGTTCATGGACACTGCTAGTTCTCTGAATGGGAAAAAAAGACCCTTTGAAGTCGAAGATGATGCCGAATCAAGATGCTCTAGTGGTGGCAACAGTAGTAGTAGAGGGTCAGGTGGAATGGGTTCCTTGTCAGGCAATAAAAAGATGAGAAAGGAGAAGATTCAAGATGTTCTGAGCATCCTGCAATGCATAGTTCCTGGTGGAAAGGACAAGGACCCAATCGAGCTTCTTGATGAAGCCATTCGTTGCTTGAAATCATTGAAACTCAAGGCCATAGAACTTGGACTTGATGCTACTATATAA 1149 0.4482 MGEDCRTWIPELHFNWQSPNLSSFNATPFGVGRQNGTSAAMNSGANVVTRNSAMPAYASSALPHSQLGHSGEPHGWFYCLPRFRQGFTTPAQTFNAEEKLPAGHANGLGVEVAPNRESGFPQKQLLVIDQTGDQTTLVYSSRFGGPVDCHVSWDSKLHGSINLNNGNELLNLRRDVNHVVGLGPTLDDKVHENTGTDDDIESEMHEDTEEINALLYSDSDGYSTEDDDDDEVTSTGHSPSTMTTHDDNQEEPHRRTAEEVASSVGETKKRKLLDGAYDDDNLQFMDTASSLNGKKRPFEVEDDAESRCSSGGNSSSRGSGGMGSLSGNKKMRKEKIQDVLSILQCIVPGGKDKDPIELLDEAIRCLKSLKLKAIELGLDATI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02013 382 MobiDBLite consensus disorder prediction 244 267 - -
Gma02g02013 382 PANTHER TRANSCRIPTION FACTOR BHLH145 1 379 - -
Gma02g02013 382 MobiDBLite consensus disorder prediction 307 323 - -
Gma02g02013 382 MobiDBLite consensus disorder prediction 184 204 - -
Gma02g02013 382 MobiDBLite consensus disorder prediction 288 331 - -
Gma02g02013 382 PANTHER TRANSCRIPTION FACTOR BHLH145 1 379 IPR037546 -
Gma02g02013 382 MobiDBLite consensus disorder prediction 218 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02013 Gma-Chr2 45633881 45636444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02013 75 373 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 31.046 3.01e-21 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02013 - - gmx:100812109 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02013 02 45633881 45636444 Gma02g02013 02 45633881 45636444 ECH
Gma14g01793 14 48288303 48289439 Gma02g02013 02 45633881 45636444 GST
Gma02g02013 02 45633881 45636444 Gma04g00850 04 8345639 8347978 PCT
Gma02g02013 02 45633881 45636444 Gma06g00838 06 7725331 7727677 PCT
Gma04g00850 04 8345639 8347978 Gma02g02013 02 45633881 45636444 PCT
Gma06g00838 06 7725331 7727677 Gma02g02013 02 45633881 45636444 PCT