Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02011 ATGCGCTACCTCACTTGCAACGCCGAGTCCGCAATAGCCACATGCGACCCTCACTCCCTCAAGAAGAAGAAAAAGCCCAAAAGTCCAGCCCAGGCCCAGCCGGTGCGACACTTCGCCTACTCCGACATCCTGGACGCCACCAACAACTTCTCTGCCGACACCTTCCTAGGTAAAGGCAGCCACGGCACCGTCTACAAGGCCGCCTTCCACGGCGGCGCCCTCGTCGCCGCCGTCAAAATAACCAAACCCAAAACCTCAAACGAAATCGAAATTCTCTCCCACCTCAAAAAAAACCCTCGTCTTGTTAACCTAATTGGCTTCTGCAACGACCAAACCCAAACTAACAACATTAACACCAACAAACTCATTGTTGTCGAGTACATGCCAAACGGTTCGCTCCACGAGCTTCTCCACTCGACTAAAAAACCGGTTCGACCCCCAAGCTGGACCGCGCGAGTCCGGTTTGCGGTTCAGGTCGCGAAAGCGGTTCGCGTTTTACACTCTTCCGAACCGCCAGTTATTCACAGGGACATAAAATCGTCCAATGTGTTAATCGACGAAAAGTGGAACGCTAGACTCGGTGACTTCGGGCTCGCGGTGAGGGGACACGTGGCGGATTCTCGCGTGCCACCGGCGGGGACGTTAGGATACCTCGACCCGTGCTATCTTGCGCCGGGAGATCTAAGTTCCAAGAGCGATGTCTTCAGTTTCGGAGTTTTGCTGCTCGAGATCGCGAGTGGGAGGCACGCGCTCGACGTGAGGCACAGTCCGCCGTCGGTGCTGGACTGGGCGGTGCCGCTGGTCCGGCGCGGCGAGTTTAAGGAGATTTGTGACCCGAGAATTGGAGCACCGCCGGACATGGCGGCGTTCCGGCGGATGGCGGTGCTGGCGGCGAGGTGCGTGAGGAGCACCCCGGAGAGAAGGCCGTCGATGGTGGAGGTGTTGGAGTGTCTAACGGCGGTGAGAAAATGTTTTCGCGCGCCGGTAATGTGGAAGAGGATTAAGAGGCGCGTGGAGATAGCGCGTGGGGATTTGTTTCATGATTGGGACAGGAGTGAGGAAGTTGTGAGAGTAGTTAAGTTAGGAAGTAGTAGTAGTAGAAGGAACGGGAAAGTATCTAGTGTGTCGGGTGTAGAGTATGAGGGTGGACACGCGAATCCAGCGGTGAGATCTAGATCGGttggttcgggttcgggtttggttgggtttgggttCAAGAATAGAAAAGGGAAAGTGAGGCTAAAGAGATCGAGGTCTATGGGGAGTCCGGTGCCTCTCCGGTGGTGA 1287 0.5447 MRYLTCNAESAIATCDPHSLKKKKKPKSPAQAQPVRHFAYSDILDATNNFSADTFLGKGSHGTVYKAAFHGGALVAAVKITKPKTSNEIEILSHLKKNPRLVNLIGFCNDQTQTNNINTNKLIVVEYMPNGSLHELLHSTKKPVRPPSWTARVRFAVQVAKAVRVLHSSEPPVIHRDIKSSNVLIDEKWNARLGDFGLAVRGHVADSRVPPAGTLGYLDPCYLAPGDLSSKSDVFSFGVLLLEIASGRHALDVRHSPPSVLDWAVPLVRRGEFKEICDPRIGAPPDMAAFRRMAVLAARCVRSTPERRPSMVEVLECLTAVRKCFRAPVMWKRIKRRVEIARGDLFHDWDRSEEVVRVVKLGSSSSRRNGKVSSVSGVEYEGGHANPAVRSRSVGSGSGLVGFGFKNRKGKVRLKRSRSMGSPVPLRW 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02011 428 Gene3D Phosphorylase Kinase; domain 1 11 127 - -
Gma02g02011 428 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Gma02g02011 428 SMART serkin_6 50 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02011 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Gma02g02011 428 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 356 - -
Gma02g02011 428 SUPERFAMILY Protein kinase-like (PK-like) 33 335 IPR011009 -
Gma02g02011 428 Gene3D Transferase(Phosphotransferase) domain 1 128 332 - -
Gma02g02011 428 Pfam Protein kinase domain 53 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02011 428 ProSiteProfiles Protein kinase domain profile. 50 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02011 428 PANTHER OS01G0253100 PROTEIN 1 356 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02011 Gma-Chr2 45609162 45610703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02011 36 318 Receptor kinase-like Gene Family AT3G59420 42.424 1.50e-64 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma02g02011 Pkinase 1.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02011 - - gmx:100811580 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02011 02 45609162 45610703 Gma02g02011 02 45609162 45610703 ECH
Gma02g02011 02 45609162 45610703 Gma04g00852 04 8381640 8383439 PCT
Gma02g02011 02 45609162 45610703 Gma06g00840 06 7758936 7760648 PCT
Gma04g00852 04 8381640 8383439 Gma02g02011 02 45609162 45610703 PCT
Gma06g00840 06 7758936 7760648 Gma02g02011 02 45609162 45610703 PCT