Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02010 ATGGAATTCGACGAGCAAGAGGAGCATGAGGAGGAGGAGGAAATGGGGATGCCGGAGCCGGCGGTGGCGGTGGCGGCGCCGCAGACTTTTGACTCGCGGTCGAAAATCGGCGGCGGCGAGGCGCGGAAGAGCGCGTTCGGCGTGGCGGCGGTGCGgtaccgagaatgccagaagaaccacgccgtcagcttcggcggccacgccgttgacggctgctgcgagttcatggccgccggagacgacggcatgctggaaggcgtcatctgcgccgcatgcaactgccaccggaatttccaccgcaaggagatcgacggcgagatgtcctccttccaccaccgcgcgcaacctccaccgccgccgttgcaccaccaccaccaattctccccgtactaccaccaccgcgtcccgcagcaccccaccgccgccggctacatccaccaccacctcacacctccgatgtcgcagcaccgcccgctcgccctcccggccgccgcatccggcggcggcctcagccgcgaagaagaagacatgtcaaaccctagcagcagcggcggcggaggtggcggtggcggcggtggatccaaaaaacgGGTTGCTGGGTTGATGAGTAGCGAGTTCAGAGATGGGCCAACCTCATGGGCCCTACTTGCTACAAAACGTTAA 663 0.2157 MEFDEQEEHEEEEEMGMPEPAVAVAAPQTFDSRSKIGGGEARKSAFGVAAVRYRECQKNHAVSFGGHAVDGCCEFMAAGDDGMLEGVICAACNCHRNFHRKEIDGEMSSFHHRAQPPPPPLHHHHQFSPYYHHRVPQHPTAAGYIHHHLTPPMSQHRPLALPAAASGGGLSREEEDMSNPSSSGGGGGGGGGGSKKRVAGLMSSEFRDGPTSWALLATKR 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02010 220 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 52 103 IPR006456 -
Gma02g02010 220 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 40 207 - -
Gma02g02010 220 MobiDBLite consensus disorder prediction 1 38 - -
Gma02g02010 220 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 53 102 IPR006456 -
Gma02g02010 220 MobiDBLite consensus disorder prediction 1 17 - -
Gma02g02010 220 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 40 207 - -
Gma02g02010 220 Pfam ZF-HD protein dimerisation region 51 103 IPR006456 -
Gma02g02010 220 MobiDBLite consensus disorder prediction 154 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02010 Gma-Chr2 45585873 45592092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02010 49 185 ZF-HD Transcription Factor Family AT4G24660 48.175 5.81e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gma02g02010 ZF-HD_dimer 1.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02010 - - gmx:100811041 355.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01791 14 48217773 48221303 Gma02g02010 02 45585873 45592092 GST
Gma02g02010 02 45585873 45592092 Gma04g00853 04 8391932 8393244 PCT
Gma02g02010 02 45585873 45592092 Gma06g00842 06 7773794 7775591 PCT
Gma04g00853 04 8391932 8393244 Gma02g02010 02 45585873 45592092 PCT
Gma06g00842 06 7773794 7775591 Gma02g02010 02 45585873 45592092 PCT