Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02006 ATGGTCGCCAATTCCCACAGAGTGGGTTCTTCCTACGGTGGCGCTGCCCCTTACCGATCAAGAGATGGGCTTAGCCCCCGACCCGTTGGTGCCTCAGAGGAGATCCAATTACGAATTGATCCCTTGGACTTGGACGATGAGATCACTGGTCTTCATCGCCAAGTTAGAAGATTGAAACATGTTGCTGAGGAGATAGGAACAGAAGTGAAGTATCAGAAAAATTTTCTTGAAGAACTGCAAATGACAATGATAAAGGCTCAAGCTGGAGTAAAAAATAACTTGAGAAGATTGAACAAGAGCATCATCCAAAGTGGTTCAAACCATATTATTCATGTCATTCTTTTTGCGTTAGTTTGTTTCTTTGTAGTGTACCTTTGGTCCAAGATGATCAGAAAGTGA 399 0.4286 MVANSHRVGSSYGGAAPYRSRDGLSPRPVGASEEIQLRIDPLDLDDEITGLHRQVRRLKHVAEEIGTEVKYQKNFLEELQMTMIKAQAGVKNNLRRLNKSIIQSGSNHIIHVILFALVCFFVVYLWSKMIRK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02006 132 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 45 100 IPR000727 -
Gma02g02006 132 Gene3D - 45 107 - -
Gma02g02006 132 CDD SNARE_Qc 43 99 - -
Gma02g02006 132 SUPERFAMILY SNARE fusion complex 43 99 - -
Gma02g02006 132 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 9 131 - -
Gma02g02006 132 PANTHER GOLGI SNARE BET1-RELATED 9 131 IPR039897 GO:0015031|GO:0030173
Gma02g02006 132 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02006 Gma-Chr2 45536116 45539185 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02006 K08505 - gmx:100500358 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g01787 14 48087041 48096052 Gma02g02006 02 45536116 45539185 GST
Gma02g02006 02 45536116 45539185 Gma04g00890 04 8940740 8942111 PCT
Gma02g02006 02 45536116 45539185 Gma06g01237 06 11626087 11628053 PCT
Gma04g00890 04 8940740 8942111 Gma02g02006 02 45536116 45539185 PCT
Gma06g01237 06 11626087 11628053 Gma02g02006 02 45536116 45539185 PCT