Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g02005 ATGATAATGAAAAAGAAACGAAAGGAAAGCGAGGCCAGTGGACGGTCGAACTTGCCGGATGAGATTTCGAAGTCGCATTACTCCCTTGAGCGGCGTTCGCGGTTGATCAAACGGTGCAGGGAAGACGGCGTCGTGGCGACGGTGCCGCCGTCACGCGGCGCGTCGTTATTCCTAACGCCGTCGCGGGGCTTGAAGCGGAAGATAGGTTGCATCGACAAGGCCACGCAGATGGGGCGCAGCGTGAGGATCGAGGACGACTACGTGACCGGGGGCAGCGCGATCGGGCAGGGGAAGTTCGGGTCGGTGACGGTGTGCCGCGCACGTGCGAACGGCGCGGAGCACGCGTGCAAGACGCTGAGGAAGGGGGAGGAGACGGTGCACCGCGAGGTGGAGATAATGCAGCACCTGTCGGGGCACCCTGGGGTGGTGACGCTGGAGGCGGTGTATGAGGATGAGGAGTGTTGGCATCTTGTGATGGAGTTGTGTTCTGGGGGGAGGTTGGTTGATAGGATGAAGGAGGGGCCGTGTTCGGAACACGTGGCGGCGGGGATACTGAAGGAGGTGATGTTGGTGGTTAAGTATTGCCATGATATGGGTGTCGTGCATAGAGATATTAAGCCTGAGAATATCTTGCTCACCGCGGCCGGGAAGATCAAGCTTGCGGATTTCGGGCTCGCCATCAGGATTTCTGAGGGTCAGAATTTGACAGGTGTGGCTGGGAGCCCTGCATATGTTGCGCCAGAAGTGTTGTTGGGTAGATATTCTGAGAAGGTGGATATATGGAGTTCTGGGGTGCTCCTGCATGCTTTGTTGGTTGGTGGTCTTCCATTTAAAGGAGATTCACCGGAAGCAGTTTTTGAGGAAATTAAGAATGTCAAACTAGATTTTCAAACAGGGGTGTGGGAATCAATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATGTTTCAGCAAGGATAACAGCTGATGAAGTACTAAGGCATCCATGGATATTGTTCTATACTGAACGCACATTAAAGATGCTGCCTGTTAAATCAAAATTGAAACTCCAAAATGCAGCTGCTTGCCAAAATGAATCTGGGTTAGTAGGAGGAAACAAGATAGTTGATGATGGCTCCCTTGATGAGGATTATTCAAGCCCGTTTTCATCCTCTGAGAGTTGCAATTCAGAGTATCATGAGGACTGTGCGTGGATTGATGCACTTTCCACTGCAGTTTCACGTGTGAGGATATCCGAAACAAAGAGGACCAAGTTGTGGGGTTCTACTAGTCCACTTGATCAACAAGGTTCATCTAACATGAAGACTAACCTCTGTAAAGCATTCTGA 1341 0.5153 MIMKKKRKESEASGRSNLPDEISKSHYSLERRSRLIKRCREDGVVATVPPSRGASLFLTPSRGLKRKIGCIDKATQMGRSVRIEDDYVTGGSAIGQGKFGSVTVCRARANGAEHACKTLRKGEETVHREVEIMQHLSGHPGVVTLEAVYEDEECWHLVMELCSGGRLVDRMKEGPCSEHVAAGILKEVMLVVKYCHDMGVVHRDIKPENILLTAAGKIKLADFGLAIRISEGQNLTGVAGSPAYVAPEVLLGRYSEKVDIWSSGVLLHALLVGGLPFKGDSPEAVFEEIKNVKLDFQTGVWESISKPARDLVGRMLTRDVSARITADEVLRHPWILFYTERTLKMLPVKSKLKLQNAAACQNESGLVGGNKIVDDGSLDEDYSSPFSSSESCNSEYHEDCAWIDALSTAVSRVRISETKRTKLWGSTSPLDQQGSSNMKTNLCKAF 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g02005 446 Gene3D Phosphorylase Kinase; domain 1 91 167 - -
Gma02g02005 446 MobiDBLite consensus disorder prediction 1 15 - -
Gma02g02005 446 Gene3D Transferase(Phosphotransferase) domain 1 168 366 - -
Gma02g02005 446 Pfam Protein kinase domain 92 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02005 446 ProSiteProfiles Protein kinase domain profile. 88 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02005 446 SMART serkin_6 88 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g02005 446 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 19 438 - -
Gma02g02005 446 SUPERFAMILY Protein kinase-like (PK-like) 85 359 IPR011009 -
Gma02g02005 446 CDD STKc_CAMK 91 334 - -
Gma02g02005 446 MobiDBLite consensus disorder prediction 1 24 - -
Gma02g02005 446 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 438 - -
Gma02g02005 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g02005 Gma-Chr2 45531962 45535032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g02005 5 335 EF-hand Containing Proteins AT4G04720 39.181 3.94e-75 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma02g02005 Pkinase 8.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g02005 - - gmx:100809977 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02005 02 45531962 45535032 Gma02g02005 02 45531962 45535032 ECH
Gma14g01786 14 48082080 48085264 Gma02g02005 02 45531962 45535032 GST
Gma02g02005 02 45531962 45535032 Gma04g00891 04 8944166 8946495 PCT
Gma02g02005 02 45531962 45535032 Gma06g00880 06 8147692 8151812 PCT
Gma04g00891 04 8944166 8946495 Gma02g02005 02 45531962 45535032 PCT
Gma06g00880 06 8147692 8151812 Gma02g02005 02 45531962 45535032 PCT