Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01969 ATGGCTCTCCACTCTCtcttcttcttcttcttcttcttcttctCACGCTACACTCTCTCTTCCGCTTCCCAGCCTCGCAACCCCGAAGTGGAGGCTTTGATGTACATTAAGGCAGCTCTCCATGACCCACACGGCGTCCTCAACAACTGGGATGAATACTCCGTCGACGCTTGCAGCTGGACCATGATCACTTGCTCTTCTGATTACCTTGTCATAGGCCTTGGAGCGCCTAGCCAATCTCTCTCCGGAACTTTATCTCCATCTATCGGAAATCTAACAAATCTTCGACAAGTATTACTGCAGAACAACAATATCTCAGGCAACATACCACCGGCACTTGGAAACCTTCCCAAGCTTCAGACATTAGACCTTTCCAATAACCGTTTCTCAGGGCTGATTCCTGCATCTCTTAGTCTATTGAATAGTCTCCAGTACTTGAGACTCAACAACAATAATTTGTCCGGATCCTTTCCAGTGTCACTGGCCAAAACCCCACAGCTTGCTTTCTTGGACTTGTCTTATAACAATCTCAGTGGACCATTGCCAAAGTTCCCAGCCAGGTCATTCAATATTGTGGGGAACCCATTAGTTTGTGGAAGCAGCACCACTGAAGGTTGCTCTGGGTCAGCAACCCTCATGCCCATTTCTTTCTCCCAAGTGTCATCAGAAGGAAAACACAAGTCTAAAAGACTAGCAATAGCACTTGGGGTCAGTCTTAGCTGCGCCTCCCTCATCCTTTTGCTTTTTGGGCTATTGTGGTATAGAAAGAAACGACAGCACGGAGCCATGCTTTATATCAGCGATTGTAAGGAAGAGGGAGTTCTTAGCTTGGGAAATCTGAAAAATTTCAGTTTCAGAGAGCTGCTACATGCAACGGATAATTTCAGCTCTAAGAATATCCTTGGTGCTGGAGGCTTTGGCAATGTCTATAGGGGGAAGCTTGGAGATGGCACAATGGTGGCAGTGAAAAGGCTGAAAGATGTAAATGGTAGTGCTGGTGAATCACAGTTCCAAACCGAGTTGGAGATGATCAGCTTGGCAGTTCATCGCAATTTACTTCGCTTAATTGGATACTGTGCTACTCCTAATGAGAAACTTTTGGTTTATCCTTATATGTCTAATGGCAGTGTGGCCTCCAGGCTCAGAGGAAAACCAGCTTTAGATTGGAACACAAGAAAGAGGATAGCAATTGGAGCTGCCAGAGGTCTTCTGTATTTGCACGAGCAATGTGATCCAAAGATAATACACAGAGATGTTAAGGCTGCCAATGTGCTTCTGGATGACTATTGTGAGGCTGTTGTTGGAGATTTTGGCCTTGCAAAGCTCCTTGACCATGCTGATTCCCATGTCACAACTGCTGTCCGTGGCACTGTTGGACACATTGCACCAGAGTACCTCTCCACCGGCCAATCATCTGAGAAAACAGATGTCTTTGGATTTGGCATTCTCTTGTTAGAGCTCATAACTGGAATGACAGCACTCGAGTTTGGGAAAACAGTGAATCAAAAAGGTGCTATGCTAGAGTGGGTTAGGAAAATACTACACGAAAAGAGGGTTGCAGTGTTGGTGGACAAAGAGCTAGGAGACAATTATGATAGAATAGAGGTGGGGGAGATGCTGCAAGTTGCTTTACTGTGTACTCAATATTTGACAGCCCACCGCCCTAAAATGTCTGAAGTGGTTCGAATGCTTGAAGGTGATGGGCTTGCTGAGAAGTGGGCATCTTCACATAATTACGGTAATCAAGACATGAACCCCAGCCACGGCAACAATAGCAATACTTCATCCCGCCCTACCTCTGCTTCAAAACATGATGATGACGTTCATGACCGTTCCAGTATGTTTGGCATGACAATGGATGATGATGATGAACAGTCTTTGGAATCCTATGCAATGGAACTCTCTGGTCCTAGATAA 1917 0.4507 MALHSLFFFFFFFFSRYTLSSASQPRNPEVEALMYIKAALHDPHGVLNNWDEYSVDACSWTMITCSSDYLVIGLGAPSQSLSGTLSPSIGNLTNLRQVLLQNNNISGNIPPALGNLPKLQTLDLSNNRFSGLIPASLSLLNSLQYLRLNNNNLSGSFPVSLAKTPQLAFLDLSYNNLSGPLPKFPARSFNIVGNPLVCGSSTTEGCSGSATLMPISFSQVSSEGKHKSKRLAIALGVSLSCASLILLLFGLLWYRKKRQHGAMLYISDCKEEGVLSLGNLKNFSFRELLHATDNFSSKNILGAGGFGNVYRGKLGDGTMVAVKRLKDVNGSAGESQFQTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAMLEWVRKILHEKRVAVLVDKELGDNYDRIEVGEMLQVALLCTQYLTAHRPKMSEVVRMLEGDGLAEKWASSHNYGNQDMNPSHGNNSNTSSRPTSASKHDDDVHDRSSMFGMTMDDDDEQSLESYAMELSGPR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01969 638 MobiDBLite consensus disorder prediction 575 638 - -
Gma02g01969 638 Gene3D Phosphorylase Kinase; domain 1 265 371 - -
Gma02g01969 638 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Gma02g01969 638 Gene3D Ribonuclease Inhibitor 26 208 IPR032675 -
Gma02g01969 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Gma02g01969 638 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 638 - -
Gma02g01969 638 ProSiteProfiles Leucine-rich repeat profile. 118 140 IPR001611 GO:0005515
Gma02g01969 638 PRINTS Leucine-rich repeat signature 119 132 - -
Gma02g01969 638 PRINTS Leucine-rich repeat signature 164 177 - -
Gma02g01969 638 MobiDBLite consensus disorder prediction 600 618 - -
Gma02g01969 638 SUPERFAMILY Protein kinase-like (PK-like) 278 565 IPR011009 -
Gma02g01969 638 Gene3D Transferase(Phosphotransferase) domain 1 372 582 - -
Gma02g01969 638 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Gma02g01969 638 Pfam Protein kinase domain 296 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01969 638 SMART serkin_6 295 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01969 638 ProSiteProfiles Protein kinase domain profile. 295 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01969 638 SUPERFAMILY L domain-like 26 191 - -
Gma02g01969 638 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 638 - -
Gma02g01969 638 MobiDBLite consensus disorder prediction 575 599 - -
Gma02g01969 638 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01969 Gma-Chr2 45068853 45073522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01969 8 638 Receptor kinase-like Gene Family AT5G16000 63.509 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gma02g01969 Pkinase 3.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01969 - - gmx:100797186 1238.79