Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01952 ATGCAGCAGAGTGATCAAACGGTGTTGAGCTTGAGGCCCGGTGGTGGAAGAGGCAGCAGGCTCCTCGCTCCTCGATTCGACTCCTCCTCTTCATCCGCTTCCCCTGCTTTTGGCTCCTTTCCCGCTGATCTTCCTCTCCTGCGTCCCCACGGTGGAGCTCCCTCACCCTTCTCTATCAAGGCTGGAGATGCTCGGTTTGAGGGTCGTGAGCGTGTGCGATATACAAGGGAACAGCTTTTACTGCTTAGAGAGGGTGTTGAGATCCTTGATGATGTTTTAAAGATCAAACAAGATATTGAAGCTGAACTTTTTGGTGAAGATCAAAGCTGGGCCCGCTCAGAAAACAACCCCTCACAGCAATTTCGGTATTCTGAGCCAGATAATCGTGACTGGCGTGGACGATCTGGTCAACTTTCCGGTAATGCAGATGAGAGATCTTGGGATAATCTCAAGGAGAACAGGGAGTTTGGCAATACTAATAACCGTCAAGACCAACTGAACTCTCAGTTTGCAAGGGCACAAATCTCTTCTAACCAAGGGGGAGGACCTACTCCGACACTAGTCAAGGCTGAGGTGCCATGGTCAGCTAGAAGGGGAACTCTCTCTGACAAGGATCGCGTCTTAAAGACAGTTAAAGGAATACTAAATAAGTTGACTCCGGAGAAATTTGATCTCCTGAAGGGTCAGTTGATCGATTCTGGCATTACATCAGCCGACATATTGAAGGGAGTTATTTCGCTGATATTTGATAAGGCAGTGCTAGAACCAACATTTTGCCCCATGTATGCTCAGCTGTGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGATGAGCCTGGTGGGAAAGAAATCACTTTTAAGCGAGTACTCTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCAGATAAACTGAGAGGAGAACTGAGACAGATGAATGCCCCTGACCAGGAGATGGAGCGACGGGACAAGGAAAGACTTCTCAAGATTCGAACCCTTGGAAATATCCGTTTAATTGGTGAGCTGTTGAAGCAAAAAATGGTTCCTGAAAAGATTGTTCATCACATTGTTCAGGAGCTTTTAGGACCTCCAGATATCAAGGTCTGTCCAGCTGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCAACACAATTGGTAAGCAGCTTGATGAAAGCCCAAAATCACGGCGTATAAATGATATGTACTTTATCCGGTTGAAAGAATTGAGCACCAACCCCCAACTTGCACCACGGCTGCGGTTTATGGTTCGTGATGTTCTAGATTTGCGTTCTAATAACTGGATTCCAAGACGTGAAGAGGTGAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAAAAAAATCTTGGATTGCGTCCAGGTGCCACTGCAAGTATGAGAAGTAACCGTGTAGTTTCTGGCGCTCAAGGAAATACCGGTCCAGGAGGATTCCCAATTGCCCGACCTGGTACAGGTGGTTTGATGCCTGGGATGCCGGGGACCAGGAGGATGCCTGGGATGCCTGGAATTGATAATGACAACTGGGAGATGCCTAGGACAAGATCAATGCCGAGAGGAGACATATCAGGCATGCCAACTGGAGGACGTGGCCAGTCTCCTTTCCTTTCCAAGACATCCACTGTGAACTCAAAGTTACTACCTCAAGGTAGTGGTGGTATTATAAGTGGGAGAAGCAGTGCCCTGGTGCATGGAGCTGGTGCTCCTGTTCGTTCGCCAAACCTTGGTTTTAGTGCTGAGCCCACACCTCAAATCCCTTCACCTGTTAAAGCTGTTTCTGCCATACCCTCTGAGAAGCCACAACCTCCAGCTGCAAAATTGAATATTGATGAACTTCAGCGTAAAACTGTTTCTCTACTGGAAGAATATTTCAGTGTCAGGCTTTTGGACGAGGCATTACAGTGTGTGGAGGAACTAAAAGCTCCAGCTTATTACCCTGAGTTTGTCAAGGAAGCCATTTCCCTTGCACTAGATAAGAGTCCACCATGCGTTGAACCTGTTGCAAATCTTTTTGAGTACCTGCTAATTAAGAAGATTCTTTCAGCCAGAGACATAGGGACCGGGTGCATGTTATTTGCTTCTCTGCTGGATGATATCGGCATAGATTTACCTAAAGCACCAAATAATTTTGGTGAGATAATAGGTAAACTAGTTTTGGCTGGGGGTTTGGATTTTAAGGTGGTGGTAGAAATCCTTAAGAAGGTGGAGGATGACCGATTCCAGAAAGCAATATTTTCTTCTGCGTTGCAGGTAATTAGCTCTGTATCTGGGCAAGCTGTGTTGGATTCACAAGCATCTGATATTGAGGCCTGCCAGAGCCTGTTCAACTGA 2355 0.4641 MQQSDQTVLSLRPGGGRGSRLLAPRFDSSSSSASPAFGSFPADLPLLRPHGGAPSPFSIKAGDARFEGRERVRYTREQLLLLREGVEILDDVLKIKQDIEAELFGEDQSWARSENNPSQQFRYSEPDNRDWRGRSGQLSGNADERSWDNLKENREFGNTNNRQDQLNSQFARAQISSNQGGGPTPTLVKAEVPWSARRGTLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRVLLNICQEAFEGADKLRGELRQMNAPDQEMERRDKERLLKIRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDIKVCPAEENVEAICQFFNTIGKQLDESPKSRRINDMYFIRLKELSTNPQLAPRLRFMVRDVLDLRSNNWIPRREEVKAKTITEIHSEAEKNLGLRPGATASMRSNRVVSGAQGNTGPGGFPIARPGTGGLMPGMPGTRRMPGMPGIDNDNWEMPRTRSMPRGDISGMPTGGRGQSPFLSKTSTVNSKLLPQGSGGIISGRSSALVHGAGAPVRSPNLGFSAEPTPQIPSPVKAVSAIPSEKPQPPAAKLNIDELQRKTVSLLEEYFSVRLLDEALQCVEELKAPAYYPEFVKEAISLALDKSPPCVEPVANLFEYLLIKKILSARDIGTGCMLFASLLDDIGIDLPKAPNNFGEIIGKLVLAGGLDFKVVVEILKKVEDDRFQKAIFSSALQVISSVSGQAVLDSQASDIEACQSLFN 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01952 784 Gene3D - 613 779 - -
Gma02g01952 784 SMART if4_15 208 434 IPR003890 GO:0003723|GO:0005515
Gma02g01952 784 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 783 IPR045208 GO:0003743
Gma02g01952 784 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 783 - -
Gma02g01952 784 SUPERFAMILY ARM repeat 614 771 IPR016024 -
Gma02g01952 784 MobiDBLite consensus disorder prediction 110 124 - -
Gma02g01952 784 Pfam MIF4G domain 208 434 IPR003890 GO:0003723|GO:0005515
Gma02g01952 784 SMART ma3_7 620 732 IPR003891 -
Gma02g01952 784 Gene3D - 200 435 - -
Gma02g01952 784 ProSiteProfiles MI domain profile. 619 741 IPR003891 -
Gma02g01952 784 SUPERFAMILY ARM repeat 202 436 IPR016024 -
Gma02g01952 784 MobiDBLite consensus disorder prediction 110 146 - -
Gma02g01952 784 Pfam MA3 domain 620 732 IPR003891 -
Gma02g01952 784 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01952 Gma-Chr2 44866327 44872258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01952 1 782 Eukaryotic Initiation Factors Gene Family AT5G57870 67.342 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01952 K03260 - gmx:100789296 1503.42