LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma02g01948	ATGATGGCATTCCAAAGCAAGGCACATATCTTGTTCCTGTGCTTATTAATCTTTGCATTTTCATCCATTAATATTCTTGCTGCTGCTGTGCCAAAAGAGCAAGAGCAAGATCGAATCTCGGCGCTGCCGGGGCAGCCACGTGTGGCATTCTCTCAGTTCTCCGGTTATGTCACTGTGAACGAGCAACATGGCCGATCACTCTTCTACTGGTTCACTGAATCCCCCACTTCCCCGCAGAATAAACCTGTTGTTCTCTGGCTCAACGGAGGGCCAGGATGCTCATCGGTAGCATACGGGGCATCAGAGGAAATTGGGCCGTTTCGTATAAACAAAACTGGCTCTTCTCTATATCTCAACAAATATGCATGGAACAGAGAAGCAAATGTCCTCTTTCTTGAATCGCCTGCTGGTGTTGGCTTCTCATACACAAATACCAGCTCTGATCTCAAAACTTCAGGGGACAAAAGGacagCTCAGGATGCACTGATTTTTGTAATTAGATGGATGTCAAGATTTCCACAATATAAATATAGGGAGTTTTACATTGCTGGAGAGAGCTATGCAGGGCACTACGTCCCCCAGTTGGCTAAGAAAATTCATGATTATAATAAAAAGAATCCTCAAATTATTAATCTCAAAGGGTTCATTGTGGGAAATGCTGTGACTGATAGCTACAATGATGGGATTGGAACTGTCACATATTGGTGGAGCCATTCTATGATATCTGATCAGTCATACAAATCTATCCTCAAATACTGCAATTTCACAGCAGAAGAAACATCTAAAAAATGTGATGATGTTTATAGTTATGCGGTTAACTATGAATTTGGAAATATAGACCAGTACAGCATTTATACTCCTACGTGCACAACATCACAAAACAATACCGTGAGGCACATGCGATTCAAGAATCTTCATCTGATTTCTGGGTATGATCCGTGTACTGAAAATTATGCAGAGAAATACTATAACCTTCCAGAAGTGCAGATAGCAATGCATGCGAACGTTACCAACATTCCTTACAAATGGACTGCTTGCAGTGATGTGCTCCTGAAAAATTGGAAGGATTCTGAAATTTCTGTGTTGCCCATATACAAAGAGTTAATTGCCGCTGGATTAAGAATATGGGTTTTCAGCGGGGACACAGATTCTGTGGTTCCAGTTACTGCCACAAGGTTTTCTCTCAACCACCTTAACCTCAGGACCAGAACTCGTTGGTATCCATGGTACTCTGGTGGACAGGTTGGTGGATGGACAGAGGTGTATGATGGCCTAACTTTTGCAACAGTAAGAGGAGCTGGCCATGAAGTACCTTTATTTCAGCCAAAGCGAGCTTACATTCTTTTTAAGTCTTTTTTGGCAGGAAATGAACTCCCGAAATATTGA	1386	0.4206	MMAFQSKAHILFLCLLIFAFSSINILAAAVPKEQEQDRISALPGQPRVAFSQFSGYVTVNEQHGRSLFYWFTESPTSPQNKPVVLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLNKYAWNREANVLFLESPAGVGFSYTNTSSDLKTSGDKRTAQDALIFVIRWMSRFPQYKYREFYIAGESYAGHYVPQLAKKIHDYNKKNPQIINLKGFIVGNAVTDSYNDGIGTVTYWWSHSMISDQSYKSILKYCNFTAEETSKKCDDVYSYAVNYEFGNIDQYSIYTPTCTTSQNNTVRHMRFKNLHLISGYDPCTENYAEKYYNLPEVQIAMHANVTNIPYKWTACSDVLLKNWKDSEISVLPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLRTRTRWYPWYSGGQVGGWTEVYDGLTFATVRGAGHEVPLFQPKRAYILFKSFLAGNELPKY	461

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma02g01948	461	Gene3D	-	361	455	-	-
	Gma02g01948	461	ProSitePatterns	Serine carboxypeptidases, serine active site.	182	189	IPR018202	GO:0004185
	Gma02g01948	461	ProSitePatterns	Serine carboxypeptidases, histidine active site.	425	442	IPR033124	GO:0004185
	Gma02g01948	461	SUPERFAMILY	alpha/beta-Hydrolases	34	457	IPR029058	-
	Gma02g01948	461	Gene3D	alpha/beta hydrolase	33	291	IPR029058	-
	Gma02g01948	461	Pfam	Serine carboxypeptidase	44	454	IPR001563	GO:0004185\|GO:0006508
	Gma02g01948	461	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	13	460	IPR001563	GO:0004185\|GO:0006508
	Gma02g01948	461	PANTHER	SERINE CARBOXYPEPTIDASE 24	13	460	-	-
	Gma02g01948	461	Gene3D	-	314	351	-	-
	Gma02g01948	461	PRINTS	Carboxypeptidase C serine protease (S10) family signature	119	131	IPR001563	GO:0004185\|GO:0006508
	Gma02g01948	461	PRINTS	Carboxypeptidase C serine protease (S10) family signature	132	142	IPR001563	GO:0004185\|GO:0006508
	Gma02g01948	461	PRINTS	Carboxypeptidase C serine protease (S10) family signature	168	193	IPR001563	GO:0004185\|GO:0006508
	Gma02g01948	461	PRINTS	Carboxypeptidase C serine protease (S10) family signature	425	438	IPR001563	GO:0004185\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma02g01948	Gma-Chr2	44798957	44806048	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma02g01948	342	458	Calmodulin-binding Proteins	AT2G22960	31.356	1.07e-13	67.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma02g01948	K16297		-	gmx:100785391	958.747