Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01943 ATGTTTGACTGTGGTCCCAAGTCAGAATACATGGGTGGCCAGCGGGAAAATTTTTTGAGGTTGGAGGCCTTGGATTCTACACTATCTTCATCTTCTGATGCCGGAGTTATAAAATCTGGATTTAATATTGATAAATTAAGCCATGGTCATGGAAGCAGCACAACTTCTAGGTCTTTCAAAAGGGGAATGAGAAGGGGATCTGAAGGATTGAAATCAATTGGGCGATCGCTTGGGTTGGGAGTATCTAGGGCAGTGTTCCCGGAAGATCTTAAAGTGTCAGAAAAGAAGATATTTGATCCTCAAGACAAGTTTCTGCTCTTATGGAACAAACTTTTTGTTATCTCATGCATTTTGGCCGTGTCTATAGATCCACTATTTTTTTATCTACCAGTCATTAATGATTCATTTCATTGTCTTGGCATAGACCGAAAGTTGGCAACAATAGTTACAACCTTAAGGACAATGGTTGATGTTTTCTATCTTATACACATGGCTCTCCAATTCCGTACTGCTTATATTGCTCCATCTTCTCGTGTCTTTGGGCGTGGTGAGCTTGTGATAGATTCTGCACAGATAGCCAAGCGATACTTGCAGCGGTATTTCATCATTGATTTCCTATCCGTGTTGCCGATACCACAGATTGTGGTTTGGAGATTTCTTCAGAGGTCAAAAGGTTCAGATGTACTAGCAACAAAGCAGGCCTTGTTGTACATTATCTTGCTTCAGTATGTTCCTAGATTTCTCCGAATGGTACCGTTGACTTCAGAGCTTAAGAGAACAGCCGGTGTCTTTGCTGAAACTGCATGGGCAGGGGCTGCATATTATTTGCTGCTATACATGCTTGCCAGTCATATAGTTGGTGCTTTTTGGTACTTGTTAGCTATTGAACGCAATGACACATGCTGGCAGAAGGCTTGCAGTGACATTGGGTGCAAAGAAAATTTCCTATATTGTGGGAACCGGCACATGGAAGGTTATAGTGCTTGGAATAAAACAAGTGAAGATATTCAGTCAAGGTGCTCTGCAGATGGTGATCCTGCACATTTTGATTATGGAATTTTCGGGCAAGTCTTGTCTTCTGGCATCATTTCATCTAAGAAGTTCATCTCCAAATACTGTTACTGTTTATGGTGGGGGCTCCAGAATTTGAGTACACTTGGCCAGGGGCTTCAAACTAGCACCTATCCTGGGGAGGTTATCTTTTCAATAGCACTAGCTATAAGTGGCCTCATCCTTTTTGCCCTTCTGATTGGCAACATGCAGACATATCTTCAATCTCTCACCATTAGGCTTGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAGTGGATGCACCATCGCTTACTCCCACAAGATCTTAGAGAGCGTGTGAGACGGTATGACCAATATAAGTGGCTGGCAACGCGGGGTGTAGATGAAGAAAATTTAGTTCAGAGTCTACCAAAGGATCTTCGGAGAGATATTAAGCGTCATCTCTGTTTGGCCTTAGTGAGGAGGGTTCCACTATTTGAGAGTATGGATGAGAGATTGCTTGATGCCATATGTGAGAGACTGAAACCGTGTTTATTTACAGAGAATACTTACATTGTTCGGGAAGGAGATCCAGTTGATGAGATGTTGTTCATCATACGTGGTCGCCTTGAGAGTGTTACCACAGATGGTGGGAGGAGTGGATTTTTCAACCGCGGTTTTCTAAAAGAGGCTGACTTCTGTGGGGAGGAGCTTTTAACCTGGGCCCTGGATCCTAAATCTGGTTCTAATCTTCCATCTTCTACTAGAACAGTTAAGGCATTAATGGAGGTTGAGGCTTTTGCCTTAACTGCTGATGAGTTAAAATTTGTTGCTAGTCAGTTTAGGCGCCTTCACAGTAGACAGGTTCAACACACTTTCCGTTTTTACTCCCAACAATGGAGGACCTGGGCTGCATGCTTTATTCAAGCAGCATGGCGTCGGTATTCAAAAAAGAAAATTATGAAGCTTCGTCAAAAGGAAGATGAGTCAGACGGAACTCATGAAAATGTTGGTGGCAGTTCCTACAGCTTTGGTGCTGCCTTGTTAGCCTCAAAGTTTGCTGCGCACACTCTACGTGGTGTACATCGCAATCGACTTGCCAAGACTGCCAGGGAGTTAGTGAAACTACAGAAACCCCCTGAGCCTGACTTCTCTGCGGATGATGCTGACTAA 2187 0.4335 MFDCGPKSEYMGGQRENFLRLEALDSTLSSSSDAGVIKSGFNIDKLSHGHGSSTTSRSFKRGMRRGSEGLKSIGRSLGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSIDPLFFYLPVINDSFHCLGIDRKLATIVTTLRTMVDVFYLIHMALQFRTAYIAPSSRVFGRGELVIDSAQIAKRYLQRYFIIDFLSVLPIPQIVVWRFLQRSKGSDVLATKQALLYIILLQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIERNDTCWQKACSDIGCKENFLYCGNRHMEGYSAWNKTSEDIQSRCSADGDPAHFDYGIFGQVLSSGIISSKKFISKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLATRGVDEENLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPKSGSNLPSSTRTVKALMEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKKKIMKLRQKEDESDGTHENVGGSSYSFGAALLASKFAAHTLRGVHRNRLAKTARELVKLQKPPEPDFSADDAD 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01943 728 Pfam Ion transport protein 107 429 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma02g01943 728 CDD CAP_ED 503 634 IPR000595 -
Gma02g01943 728 PRINTS EAG/ELK/ERG potassium channel family signature 153 163 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma02g01943 728 PRINTS EAG/ELK/ERG potassium channel family signature 164 173 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma02g01943 728 PRINTS EAG/ELK/ERG potassium channel family signature 281 291 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma02g01943 728 PRINTS EAG/ELK/ERG potassium channel family signature 372 389 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma02g01943 728 PRINTS EAG/ELK/ERG potassium channel family signature 398 409 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma02g01943 728 PRINTS EAG/ELK/ERG potassium channel family signature 416 425 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma02g01943 728 PRINTS EAG/ELK/ERG potassium channel family signature 466 473 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gma02g01943 728 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 13 725 - -
Gma02g01943 728 Pfam Cyclic nucleotide-binding domain 524 614 IPR000595 -
Gma02g01943 728 Gene3D Jelly Rolls 501 621 IPR014710 -
Gma02g01943 728 Gene3D - 110 428 - -
Gma02g01943 728 ProSiteProfiles cAMP/cGMP binding motif profile. 503 587 IPR000595 -
Gma02g01943 728 ProSiteProfiles IQ motif profile. 639 668 IPR000048 GO:0005515
Gma02g01943 728 SUPERFAMILY Voltage-gated potassium channels 99 425 - -
Gma02g01943 728 Gene3D Helix hairpin bin 431 494 - -
Gma02g01943 728 SUPERFAMILY cAMP-binding domain-like 432 623 IPR018490 -
Gma02g01943 728 PANTHER NUCLEOTIDE-GATED ION CHANNEL, PUTATIVE-RELATED 13 725 - -
Gma02g01943 728 SMART cnmp_10 503 634 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01943 Gma-Chr2 44763708 44773808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01943 1 726 Ion Channels AT2G23980 75.904 0.0 1145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01943 K05391 - gmx:100784327 1421.76