Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01939 atggaccagcgccatggaccCCAACCTCTCCCAGAGTCAGACACCATAGGAAACGATTCTCACCCAAAAACGCAACTCACCAAGGAAACAGAACGAGTTGTGGAATCGCTGTCCGACGCCGAGTCGCGGCACCGCGAGTTACGGAGCTCCGACAAACCTTGTTCGGACTCCAATTTAGAAACCCTAGGCGCTGGTGTTACCTCTTCGGTTGAAACCCTTGCTGTGCAGCATCGGAGTGACGATTTGCAAGGGAGCTCTACTGCTCCGAATTCGGGTGGCAAAGCCGAAAGTAAGGAGACAGTTGAATCTCCTGAAAAGGAAACTATTGAAAGAGGAGCAGTGCAGCCACTCCAAACTCAGACAGAAAATCGGCTTCAGGTGTCTGTGTGTTCAATTCCATTGTCTGATCTATCACCAACTTCTGTTACACAATCTTTATCAATTGTTTCTAGTCCAACCGTACAAAAACAGAAAATATCTACTCCAAAGGTCAATAACACACATGTGCCAGAAGTAGATAGGAAAAATCCTTCTGGTCGCAAAACGTTATCTGCTGTTTCTGTTGCAAGGACATCAGCATCTGACGGATACAACTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGACTGTTGTGCTAAGAAGATTGAATGCTGTGATGATTCAGGTCATGTGATAGAGATTGTTTATAAAAGTGAGCACAGTCATGATCCTCCGCGGAAGACTAATTCCATTAGGGAAAATAAGTTTCTGTCTTCCAGTGAACCTATTGTAGAAAACAGTGTACCGGAGCAGCCTGTCAGAGTTCTGAAGGATGCTGATCCATCCATTTCTTCAAAAGAATCTCTACAAGAAGCACCCTGCAGCAATGATAAGAAACGACAAAATACATCTAATATCAGTGGTAATGATAAAGTTATTTTGAAAGAGGAACATGTAAATGAGCCAGAGCCGAAAAAAAGAATGAAGAAAGGTGACTTAACAGAAATGGATTCTCCAGTAAAACCTGGAAAAAAGCCCAAGTTCGTTGTACATGCAGCAGGGGATGTGGGGATATCTGGTGATGGTTACCGATGGCGCAAGTATGGGCAGAAAATGGTGAAAGGAAATCCACATCCCAGGAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCAGAAAGCACATTGAGACCGCAGTAGATAACTCAGATGCCGTCATCATAACATACAAGGGTGTACATGACCATGACATGCCAGTCCCCAAGAAACGACATGGGCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAACAGTTTGCAGGTGAAGAAACCTGACTCCCCACAAAACAAGAAAATTTCTACTCAATGGTCAGTGGACACCGAAGGAGAACTGACCGGGGAAGCGCTAGAGCTTGGAGGTGAGAAAGCAATGGAGTCAGCTCGAACACTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTAA 1518 0.4466 MDQRHGPQPLPESDTIGNDSHPKTQLTKETERVVESLSDAESRHRELRSSDKPCSDSNLETLGAGVTSSVETLAVQHRSDDLQGSSTAPNSGGKAESKETVESPEKETIERGAVQPLQTQTENRLQVSVCSIPLSDLSPTSVTQSLSIVSSPTVQKQKISTPKVNNTHVPEVDRKNPSGRKTLSAVSVARTSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKIECCDDSGHVIEIVYKSEHSHDPPRKTNSIRENKFLSSSEPIVENSVPEQPVRVLKDADPSISSKESLQEAPCSNDKKRQNTSNISGNDKVILKEEHVNEPEPKKRMKKGDLTEMDSPVKPGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNSLQVKKPDSPQNKKISTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01939 505 SUPERFAMILY WRKY DNA-binding domain 362 426 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g01939 505 ProSiteProfiles WRKY domain profile. 188 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g01939 505 SUPERFAMILY WRKY DNA-binding domain 190 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g01939 505 MobiDBLite consensus disorder prediction 318 351 - -
Gma02g01939 505 Gene3D WRKY domain 180 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g01939 505 Gene3D WRKY domain 351 427 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma02g01939 505 MobiDBLite consensus disorder prediction 24 53 - -
Gma02g01939 505 MobiDBLite consensus disorder prediction 269 353 - -
Gma02g01939 505 MobiDBLite consensus disorder prediction 1 120 - -
Gma02g01939 505 Pfam WRKY DNA -binding domain 368 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g01939 505 Pfam WRKY DNA -binding domain 195 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g01939 505 SMART WRKY_cls 193 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g01939 505 SMART WRKY_cls 366 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g01939 505 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 22 503 - -
Gma02g01939 505 MobiDBLite consensus disorder prediction 54 97 - -
Gma02g01939 505 MobiDBLite consensus disorder prediction 290 317 - -
Gma02g01939 505 ProSiteProfiles WRKY domain profile. 361 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma02g01939 505 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 22 503 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01939 Gma-Chr2 44724126 44732640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01939 80 505 WRKY Transcription Factor Family AT4G30935 54.484 1.75e-140 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma02g01939 WRKY 2.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01939 - - gmx:100782194 983.786