Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01937 ATGGGGTTGGGAGTGTTTGGTTCTGTTCTGGTTTTGGCTCTCTTATTCAAGCATTTGGCATCTCAGCAACCGAATACTGATGAATTCTTTGTGTCTGAGTTCTTGAAGAAGATGGGTTTAGCATCTTCCCAAGGCTACAACTTCTCTGCTTCTGTCTGTTCATGGCAAGGGGTTTCTTGTGATGCCAATGGAGAACATATTGTTGACTTAGTCTTTTCTGGTATGGACCTTTCTGGCACTATGCCTGACAACACCATTGGCAAGCTAAGCAAACTTCAATCTTTGGATCTTAGCCACAACAAAATCACTGGCTTGCCTTCAGATTTCTGGAGTTTAAGCTCTCTCAAGAGCCTTAACCTGTCCTCCAATCAGATTTCTGGCTCATTGACTAACAACATTGGCAACTTTGGTTTGCTAGAAAGCATTGACTTGTCCAGCAACAATTTCTCAGAGGAAATTCCTGAAGCTGTTAGCTCACTGCTGAGTCTGAGGGTCCTCAAACTTGACCACAACAGGTTTGCACACAGCATACCTTCTGGGATTCTCAAGTGCCAGTCTCTAGTTTCAATTGATGTTTCTTCAAATCAGCTGAATGGAACACTTCCAGAAGATATTTCTGGGTTAAAGTCCATTGTGAATCTCAACATATCAGGGAATTCGTTTCAGGGTTCTATTGTGGATGTGTTTCAGGGAAGATTGGAGGTTCTGGACCTTAGCAGAAACCAATTTCAAGGTCACATTCCACAGAAATTCCCACAAATTGAAATTCTCCTGAAATTGGAATATCTGAACTTGTCCAAAACTAGCCTTGTTGGTGAAATTCCTGATGAAATCTTACAAATGAGTAATTTGAGTGCACTTGATCTTTCTATGAATCATCTTAGTGGGAAAATTCCCTTGCTGAGGAATGAACACCTCCAAGTCCTTGACCTTTCAAACAACAATTTGACTGGAGCAGTCCCTCCATCTGTCTTGGAGAAACTCCCATGGATGGAGAAGTACAACTTCTCTTATAATAACCTAATCCTCTGTGCTTCTGAAATCAAACCTGAGATCCTGACAACAGCATTCTTTGGATCATTGAACAGTTGTCCAATTGCTGCAAATCCACGACTCTTCAAAAGGAGAGACACTGGAAACAAGGGAATGAAGCTAGCCCTGGCATTAAGCTTCTCAATGATCTTTGTGCTTGCTGGCCTTCTGTTTTTAGCATTTGGTTTCAGAAGGAAAACAAAAATGTGGGAATTCAAGCAAACTTCATACAAAGAAGAGCAAAACATTTCAGGTCCCTTTTCATTCCAGACTGATTCAACAACTTGGGTAGCTGATATTAAGCAAGCAACATCAGTCCCAGTAGTAATCTTTGAGAAGCCTTTGTTGAATATCACATTTGCAGACCTCTTGGCTGCAACTTCAAATTTTGATAGGGGCACCCTTTTGGCTGAAGGAAAATTTGGGCCGGTCTATAGAGGCTTTCTGCTTGGTGGCGTTCATGTGGCGGTTAAGGTTTTGGTTGTTGGTTCTACATTGACCGATGAAGAGGCTGCAAGAGAGCTAGAATTTCTTGGTAGAATCAAGCACCCCAACCTTGTTCCTTTAACTGGATATTGTGTAGCTGGGGACCAGAGAATTGCCATATATGATTACATGGAGAATGGTAACTTGCAAAACCTGCTTTATGACTTGCCACTTGGGGTACAAAGCACAGATGATTGGAGCACAGACGCATGGGAAGAAGCCGACAACAATGGTATTCAAAATGCTGGCTCTGAAGGGCTACTCACATCTTGGAGATTTCGCCACAAAATCGCCCTTGGCACGGCTCGAGCATTGGCCTTTTTGCATCATGGTTGCTCACCTCCAATAATCCACAGAGCTGTTAAGGCTAGCAGTGTCTATTTAGACTATGACTTGGAGCCAAGGTTGTCTGATTCTGGGTTGGCCAAGATTTTTGGAAGTGGCTTGGATGATGAAATTGTGCGTGGCTCGCCTGGTTATGTTCCACCAGAGTTTACTCGACCagaattggacactccaacaccaaaatctgatgtgtactgttttggggtggtgctctttgagctagtgactggaaagaTGCCAGTTGGAGATGATTACCCTGATGATAAAGAAGCAACTTTGGTAAGTTGGGTGAGAGGACTTGTAAGAAAGAACCAAGCTTCAAGAGCTATCGATCCGAAAATTCACGACACAGGACCAGATGAACAAATGGAAGAGGCTCTTAAGATTGGTTATCTTTGCACTGCTGACCTTCCCTTCAAGCGACCAAGCATGCAACAGATAGTTGGACTTCTAAAGGATATTGAACCTACTGCTAGTTAG 2343 0.4149 MGLGVFGSVLVLALLFKHLASQQPNTDEFFVSEFLKKMGLASSQGYNFSASVCSWQGVSCDANGEHIVDLVFSGMDLSGTMPDNTIGKLSKLQSLDLSHNKITGLPSDFWSLSSLKSLNLSSNQISGSLTNNIGNFGLLESIDLSSNNFSEEIPEAVSSLLSLRVLKLDHNRFAHSIPSGILKCQSLVSIDVSSNQLNGTLPEDISGLKSIVNLNISGNSFQGSIVDVFQGRLEVLDLSRNQFQGHIPQKFPQIEILLKLEYLNLSKTSLVGEIPDEILQMSNLSALDLSMNHLSGKIPLLRNEHLQVLDLSNNNLTGAVPPSVLEKLPWMEKYNFSYNNLILCASEIKPEILTTAFFGSLNSCPIAANPRLFKRRDTGNKGMKLALALSFSMIFVLAGLLFLAFGFRRKTKMWEFKQTSYKEEQNISGPFSFQTDSTTWVADIKQATSVPVVIFEKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLLGGVHVAVKVLVVGSTLTDEEAARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWSTDAWEEADNNGIQNAGSEGLLTSWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDSGLAKIFGSGLDDEIVRGSPGYVPPEFTRPELDTPTPKSDVYCFGVVLFELVTGKMPVGDDYPDDKEATLVSWVRGLVRKNQASRAIDPKIHDTGPDEQMEEALKIGYLCTADLPFKRPSMQQIVGLLKDIEPTAS 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01937 780 SUPERFAMILY L domain-like 47 342 - -
Gma02g01937 780 PRINTS Leucine-rich repeat signature 92 105 - -
Gma02g01937 780 PRINTS Leucine-rich repeat signature 112 125 - -
Gma02g01937 780 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 249 777 - -
Gma02g01937 780 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 248 - -
Gma02g01937 780 Pfam Leucine rich repeat 162 220 IPR001611 GO:0005515
Gma02g01937 780 Pfam Leucine rich repeat 82 125 IPR001611 GO:0005515
Gma02g01937 780 SMART LRR_typ_2 160 184 IPR003591 -
Gma02g01937 780 SMART LRR_typ_2 89 111 IPR003591 -
Gma02g01937 780 SMART LRR_typ_2 112 136 IPR003591 -
Gma02g01937 780 SMART LRR_typ_2 304 327 IPR003591 -
Gma02g01937 780 SMART LRR_typ_2 257 281 IPR003591 -
Gma02g01937 780 SUPERFAMILY Protein kinase-like (PK-like) 451 772 IPR011009 -
Gma02g01937 780 Gene3D Phosphorylase Kinase; domain 1 434 549 - -
Gma02g01937 780 Pfam Protein tyrosine and serine/threonine kinase 478 770 IPR001245 GO:0004672|GO:0006468
Gma02g01937 780 Gene3D Ribonuclease Inhibitor 229 300 IPR032675 -
Gma02g01937 780 Gene3D Ribonuclease Inhibitor 178 228 IPR032675 -
Gma02g01937 780 PANTHER OS06G0301201 PROTEIN 249 777 - -
Gma02g01937 780 Gene3D Ribonuclease Inhibitor 301 362 IPR032675 -
Gma02g01937 780 ProSiteProfiles Protein kinase domain profile. 474 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01937 780 ProSiteProfiles Leucine-rich repeat profile. 91 112 IPR001611 GO:0005515
Gma02g01937 780 Pfam Leucine Rich repeat 303 318 IPR001611 GO:0005515
Gma02g01937 780 Gene3D Transferase(Phosphotransferase) domain 1 550 779 - -
Gma02g01937 780 PANTHER OS06G0301201 PROTEIN 1 248 - -
Gma02g01937 780 Gene3D Ribonuclease Inhibitor 30 177 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01937 Gma-Chr2 44707270 44709834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01937 62 776 Receptor kinase-like Gene Family AT4G39400 33.204 7.48e-108 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Gma02g01937 PK_Tyr_Ser-Thr 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01937 - - gmx:100787157 1270.37