Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01933 ATGGCTATGCTCCGCAAATTGTTCTTCCGCAAGCCTCCTGATGGACTCCTCGAGATCTGCGAGAGAGTTTACGTTTTTGATTGCTGCTTCACCACGGATGCTTGGAATGAAGAGAATTACAGAGTGTACATGGATGGGATAGTTGGCCAACTAAGGGAGAACTTGCCTGATGCTTCGATTCTGATTTTCAATTTTCGCGAGGAAGATACGAAGAGTCAGATGGCAAATATCATGTCTGAGCATGACATTACTATCATGGACTATCCCCGGCATTACGAGGGTGTTCCAGTACTCAAAATGGAGCTCATTCACCACTTTTTGAGGTCAGGTGAAAGTTGGCTCTCTCTTAGCCAGCATAATGTGTTGCTGATGCATTGTGAACGTGGTGGTTGGCCTGTTTTGGCTTTCATGTTGGCTGCATTGTTGATTTATAGAAAGGTTTATACTGGGGAGCAGAGGACTCTGGATATGGTTTACAAGCAGGCTCCGCACGAGCTTTTGCATTTGTTGTCCCCGTTGAATCCAACCCCTTCCCAACTGAGGTATCTTTTGTATGTTTCCAGGAGGAATGTGGCCTTAGATTGGCCTCCCCTGGACAGGGCACTCATGTTGGACTGCATCATTCTCAGATTCTTCCCAAACTTTGATGGGGAAGGTGGTTGTCATCCCATTTTTAGAATTTATGGACAGGATCCCTTTAGTGCTGATAAAAATCCAAAAATGTTGTACTCAACACCGAAGAGAAGCAAAAGCGTCCGGGCCTATAAGCAGGGAGAGTGTGAACTTATCAAAATCGATATCAATTGCCATATTCAAGGTGATGTTGTCATTGAGAGCATTAACTTGAATGGTAACATGGATCGTGAAAAGATGATGTTCCGAGTCATGTTCAACACAGCTTTTGTTAGATCTAATATTTTGATGCTTAACCGGGATGAAATTGACATTTTATGGGATGCTAAAGATCACTTTCCAAAAGATTTTAGAGCCGAGATCCTTTTCTCAGAGATGGATGCTGCTGCAGCAGTTATTGCGGATGGTACCTCATGCTTTGAGGAGAAGGAAGGACTTCCAATTGAAGCATTTGCGAAGGTTCAAGAGATCTTTAGCCATGTAGACTGGATGAACCCCAAGGCTGATGCTGCACTAAATGTGCTCCAACAGATGAGTGCTTCAGCTATGAATGACAGGTTGGATACAGTTTCTGATCAGTGTATGGAAAATGGCACTTTATTGCATGAAACAAGTCCTAGAATTCCTCAGGGGAATTTGAGTGAAGCAAGACAATCTTTATCCTCAACTAAGAGATCACCAGATAATGACATGAGTAGAAAAGAGGATAAGGCCAACAAGGTCGAGGGTATTCCACAACAGCCTAGTACATCTAACATCATCTATCAAGAGACCGCCATATCTTCAGAAAGAACCACGGAATCCAATAAATGTCCAACAGGACCGACAAATGTTGACATAAAACTGCAGGCACCTCATCCTGCCTTATCTTCTTCTGTTGATACTTCTTTTTCCCCTAGAACACCTCCTTTGCGGCCTCAATCCACTAGTGCTAAAGAAGTTCATGATTCTCCTCGCCAAACAGAATCACCCCCTTCTTATCTTTTGCCTTTGCAATCAAAACACCAAACACAAGACAGAAGTTCTATCCCTACACCTGGGACCCAATTGTCATCTACTTTTCATAGTAAGTCACCAGCAGACACCATTTCCCATCCTTCAGCTTCAGCAATTACTTCAACTCAGCCATCTCCTTTACTTTCTTCCAAAAATGTGAATGAGATTCCTCCTATTAGAACAAGACTAGAGTCTTCCCCTTCACGACCTCCAACTCCACCTCCTCCTCCTACCCCTCCACTGAAGGATCATAGACTAGTTCGAGCTAAACCTCCTCCACCTCCACATCCTCCTCCTCCTCCTCCAAAGAAAGAACTACATGTTAAAGCCGAACCCCTTCCTTCTCCTCTATCTCCTATGAATGTGGAGCCACAGGTTAGAGGTGGGCCCTCTCCACCCCCTCCCCCTCCACCAAAAGAGGAGCAACCTGTTACTTTTAATGCTCCTCCACCTCCTTGTCTCTCGGGGAAAGTTGCAGGTTCTACTATAGCACCACCACCACCACCACCACCTTCCTCAGATCACATTAATTCTTCATTGCAAAAGTctccacctcctcctgcagcacctgctcctccacctcctcctggggcacctgctcctccacctccccctggtgcacctgctgctccacctcctcctgCTAAAGGAGGTCTAAAATCAGGCAGTCCATTTCCATTGTCTCTTTCTGTGAGTGGTGATGGGAATAATGTGTCAGGACCTACTAGTTCAAAGGGACGAATTCTATCACGTACGATCAGCTCAAAGAACACCAAAAAGTTGAAGCCATTGCATTGGTTGAAACTATCTAGAGCAGTGCAAGGAAGTTTGTGGGCTGAGACACAGAAATCTGGCGAAGTTTCCAAGGCCCCAGAGATTGATATGTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCTTCAGGTCCTGCCAAAAAGTCAAATGTCCAAAGCTCAGCTGGCCCTAAATCTGATAAAGTGCAACTGATTGAGCATAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCGTTGCATGATTTAATGAGCTCAGTTTTAGCACTGGAGGAGTCAGCACTAGACACTGATCAGGTTGAGAACCTCATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTTAAGGGTTATAATGGGGAAAAGGAGAAGTTAGGAAGATGTGAACAGTTCTTAATGGAATTGATGAAAGTACCACGGGTGGAATCCAAGCTCAGAGTTTTTTCGTTCAAGATTCAATTCAACTCTCAGGTTTCTGACCTTAGAAATAGCCTAAGTGTTGTGAATGCTGCTTCAGAAGAGATCAGGAATTCTGTCAAATTAAAGAGAATTATGCAAACAATACTTTCTTTAGGAAATGCTTTGAACCAAGGAACTGCCAAGGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTCACAGAGACACGTGCCCGGGATAAGAAGATGACTCTCATGCATTATCTTTGTAAGGTGCTAGATGACCAACTGCCGGAAGTTTTAGACTTCTCCAAGGATCTTGCTAACCTAGAGCCAGCAGCAAAGATCCAATTGAAGTTTTTGGCTGAGGAGATGCAAGCAATAAACAAAGGATTAGAAAAGGTGGTACAGGAACTATCAACCTCTGAAAATGACGGGCCTATATCAGAAACTTTCCGCAAGAAATTGAAAGATTTCCTCGGTTCTGCTGAAGCTGATGTCCGTTCATTGGCTTCACTATATTCCAGCGTGGGTAGGAACGTGGATAAATTGATTCTCTATTTTGGTGAAGATCCAGCTCGTTGCCCATTTGAGCAAGTTGTGTCAACTTTGCTCAACTTTACTAGGATGTTCAACAAAGCCCATGAAGAAAACCACAAGCAGCTAGAGCTTGAAATGAAGAAAACAGCAGAAAATGAGAAAAAGAAATGTGAATCAGAAAGAATTTTACCTACAGCTATCCGTACTGGCAATGCCAAATAG 3627 0.4216 MAMLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWNEENYRVYMDGIVGQLRENLPDASILIFNFREEDTKSQMANIMSEHDITIMDYPRHYEGVPVLKMELIHHFLRSGESWLSLSQHNVLLMHCERGGWPVLAFMLAALLIYRKVYTGEQRTLDMVYKQAPHELLHLLSPLNPTPSQLRYLLYVSRRNVALDWPPLDRALMLDCIILRFFPNFDGEGGCHPIFRIYGQDPFSADKNPKMLYSTPKRSKSVRAYKQGECELIKIDINCHIQGDVVIESINLNGNMDREKMMFRVMFNTAFVRSNILMLNRDEIDILWDAKDHFPKDFRAEILFSEMDAAAAVIADGTSCFEEKEGLPIEAFAKVQEIFSHVDWMNPKADAALNVLQQMSASAMNDRLDTVSDQCMENGTLLHETSPRIPQGNLSEARQSLSSTKRSPDNDMSRKEDKANKVEGIPQQPSTSNIIYQETAISSERTTESNKCPTGPTNVDIKLQAPHPALSSSVDTSFSPRTPPLRPQSTSAKEVHDSPRQTESPPSYLLPLQSKHQTQDRSSIPTPGTQLSSTFHSKSPADTISHPSASAITSTQPSPLLSSKNVNEIPPIRTRLESSPSRPPTPPPPPTPPLKDHRLVRAKPPPPPHPPPPPPKKELHVKAEPLPSPLSPMNVEPQVRGGPSPPPPPPPKEEQPVTFNAPPPPCLSGKVAGSTIAPPPPPPPSSDHINSSLQKSPPPPAAPAPPPPPGAPAPPPPPGAPAAPPPPAKGGLKSGSPFPLSLSVSGDGNNVSGPTSSKGRILSRTISSKNTKKLKPLHWLKLSRAVQGSLWAETQKSGEVSKAPEIDMSELESLFSAAVPSGPAKKSNVQSSAGPKSDKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEESALDTDQVENLIKFCPTKEEMELLKGYNGEKEKLGRCEQFLMELMKVPRVESKLRVFSFKIQFNSQVSDLRNSLSVVNAASEEIRNSVKLKRIMQTILSLGNALNQGTAKGSAIGFRLDSLLKLTETRARDKKMTLMHYLCKVLDDQLPEVLDFSKDLANLEPAAKIQLKFLAEEMQAINKGLEKVVQELSTSENDGPISETFRKKLKDFLGSAEADVRSLASLYSSVGRNVDKLILYFGEDPARCPFEQVVSTLLNFTRMFNKAHEENHKQLELEMKKTAENEKKKCESERILPTAIRTGNAK 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01933 1208 MobiDBLite consensus disorder prediction 768 794 - -
Gma02g01933 1208 SMART PTEN_C2_2 197 336 IPR014020 -
Gma02g01933 1208 MobiDBLite consensus disorder prediction 499 604 - -
Gma02g01933 1208 Coils Coil 1167 1195 - -
Gma02g01933 1208 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Gma02g01933 1208 ProSiteProfiles Formin homology-2 (FH2) domain profile. 794 1192 IPR015425 -
Gma02g01933 1208 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Gma02g01933 1208 MobiDBLite consensus disorder prediction 413 437 - -
Gma02g01933 1208 PANTHER FORMIN-J 1 1191 - -
Gma02g01933 1208 MobiDBLite consensus disorder prediction 1186 1208 - -
Gma02g01933 1208 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Gma02g01933 1208 SUPERFAMILY Formin homology 2 domain (FH2 domain) 868 1188 - -
Gma02g01933 1208 SMART it6_source 794 1208 IPR015425 -
Gma02g01933 1208 MobiDBLite consensus disorder prediction 454 487 - -
Gma02g01933 1208 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Gma02g01933 1208 MobiDBLite consensus disorder prediction 610 625 - -
Gma02g01933 1208 MobiDBLite consensus disorder prediction 669 693 - -
Gma02g01933 1208 MobiDBLite consensus disorder prediction 438 452 - -
Gma02g01933 1208 MobiDBLite consensus disorder prediction 413 794 - -
Gma02g01933 1208 MobiDBLite consensus disorder prediction 726 762 - -
Gma02g01933 1208 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Gma02g01933 1208 Gene3D Formin, FH2 domain 791 1177 IPR042201 -
Gma02g01933 1208 Coils Coil 1073 1093 - -
Gma02g01933 1208 Gene3D - 196 340 - -
Gma02g01933 1208 Pfam Formin Homology 2 Domain 799 1166 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01933 Gma-Chr2 44654327 44665541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01933 1 399 Protein tyrosine phosphatase (PTP) family AT5G58160 66.833 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01933 - - gmx:100786096 2253.79