Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01930 ATGGTTGGATGTGCAGAACCCAGTCGGCGATTAGAAAAAGACGAGTCCGTGATGGAGGCTGAAGATGGTCCATACACGTGTCGATCTGATCCACCGTTGATTAACGAAATCCGCTCTATAAAAGAAGGAAACCTTGGGCCATTAAGCTTGCTGGAAAAGAAAGGCAAGTGGCGAGTGGCCCTGCCAAACGCAGAAGCTCCGGCAGAAATTGCCACCGCAAACACGTCGAAGACGGGTAGTAATAGCACTCGCTTTCATTCTCCCACATTCCCAATTCTGAGCGTTAAGATGAGTGAGAAAGAGAAAGGCAATAATAGTGAGGGACAGTCGACGTTGCTGCACGGCAAGTACGAGCTTGGTCGTGTGCTGGGGCACGGAACGTTCGCCAAGGTGTACCACGCGCGGAACCTGAATACAGGGCAGCACGTGGCCATGAAGGTGGTGGGAAAAGAAAAGGTGATAAAGGTCGGAATGATGGAGCAGGTGAAGAGGGAGATCTCGGTGATGAAGATGGTGAAGCACCAAAACATCGTCGAACTCCACGAAGTCATGGCCAGCAAGTCCAAGATCTATATTGCCATGGAACTCGTCCGCGGCGGAGAGCTCTTCAACAAGGTCTCTAAAGGCCGCTTAAAGGAGGACGTGGCAAGACTCTACTTCCAGCAGTTAATCTCCGCCGTCGACTTCTGCCACAGCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAAAACCTCCTCCTGGACGAACACGGCAACCTCAAAGTCTCCGACTTCGGACTCACCGCTTTCTCCGAACACCTCAAGGAGGACGGGCTGTTACACACCACGTGCGGCACGCCTGCGTACGTGTCGCCTGAAGTGATAGCGAAAAAAGGCTATGACGGTGCCAAGGCTGATATATGGTCATGTGGTGTAATCCTCTACGTTCTCCTCGCAGGCTTTTTACCCTTTCAGGATGATAATTTGGTTGCCATGTATAAAAAAATTTACAGAGGGGACTTCAAGTGTCCACCCTGGTTCTCTCTTGATGCCAGGAAGCTTGTCACCAAGCTTCTCGACCCCAATCCCAATACAAGGATTAGTATTTCCAAAGTGATGGAGTCTTCTTGGTTTAAGAAACCGGTGCCGAGGAAGCTTGCTGCCGAAAAGGTGGATTTGGAGGAGGAGAAGATTGAGACCCAGCTGGAGACCATCAATGCTTTCCACATAATTTCCTTGTCGGAGGGGTTCAATTTGTCGCCCTTGTTCGAGGACAAGAGGAGGGAGGAGATGAGGTTCGCCACCGCGGGGACGCCCAGCACCGTCATTTCGCGGCTGGAGGAGGTGGCCAAGGCCGGGAAGTTCGACGTCAGGAGTAGCGAGACCAAGGTGAGGCTTCAGGGTCAGGAGCGTGGGAGGAAGGGGAAGCTGGCGATTGCCGCGGATATCTACGCCGTGACGCCGTCGTTTATGGTGGTGGAGGTCAAGAAGGACAATGGGGATACCTTGGAGTATAACCAGTTCTGCAGCAAACAGCTTCGCCCTGCGCTTAAGGATATCTTCTGGAATTCCTCCCAGAATTCCGCACCTGCTAGTGCTTGA 1581 0.5281 MVGCAEPSRRLEKDESVMEAEDGPYTCRSDPPLINEIRSIKEGNLGPLSLLEKKGKWRVALPNAEAPAEIATANTSKTGSNSTRFHSPTFPILSVKMSEKEKGNNSEGQSTLLHGKYELGRVLGHGTFAKVYHARNLNTGQHVAMKVVGKEKVIKVGMMEQVKREISVMKMVKHQNIVELHEVMASKSKIYIAMELVRGGELFNKVSKGRLKEDVARLYFQQLISAVDFCHSRGVYHRDLKPENLLLDEHGNLKVSDFGLTAFSEHLKEDGLLHTTCGTPAYVSPEVIAKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYKKIYRGDFKCPPWFSLDARKLVTKLLDPNPNTRISISKVMESSWFKKPVPRKLAAEKVDLEEEKIETQLETINAFHIISLSEGFNLSPLFEDKRREEMRFATAGTPSTVISRLEEVAKAGKFDVRSSETKVRLQGQERGRKGKLAIAADIYAVTPSFMVVEVKKDNGDTLEYNQFCSKQLRPALKDIFWNSSQNSAPASA 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01930 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Gma02g01930 526 MobiDBLite consensus disorder prediction 7 21 - -
Gma02g01930 526 MobiDBLite consensus disorder prediction 1 27 - -
Gma02g01930 526 CDD CIPK_C 399 511 - -
Gma02g01930 526 Pfam Protein kinase domain 117 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01930 526 SMART serkin_6 117 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01930 526 ProSitePatterns Protein kinases ATP-binding region signature. 123 150 IPR017441 GO:0005524
Gma02g01930 526 SUPERFAMILY Protein kinase-like (PK-like) 114 406 IPR011009 -
Gma02g01930 526 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 6 112 517 - -
Gma02g01930 526 CDD STKc_SnRK3 116 370 - -
Gma02g01930 526 PANTHER - 112 517 - -
Gma02g01930 526 ProSiteProfiles Protein kinase domain profile. 117 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01930 526 ProSiteProfiles NAF domain profile. 393 417 IPR018451 GO:0007165
Gma02g01930 526 Gene3D Transferase(Phosphotransferase) domain 1 199 375 - -
Gma02g01930 526 Pfam NAF domain 396 451 IPR004041 GO:0007165
Gma02g01930 526 Gene3D Phosphorylase Kinase; domain 1 114 198 - -
Gma02g01930 526 Gene3D Kinase associated domain 1, KA1 393 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01930 Gma-Chr2 44614943 44616577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01930 101 518 CBL-interacting serine-threonine protein kinases AT4G30960 73.843 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma02g01930 Pkinase 1.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01930 - K07198 gmx:100781111 851.277