Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01902 ATGGGGCGTGTTCGCACGAAGACGGTGAAGAAATCCTCGCGGCAAGTGATAGAGAGGTACTACTCCCGCATGACGCTGGACTTCCACACGAACAAGAAGGTTCTGGAAGAGGTGGCCATCATTCCCTCCAAGAGGCTCCGCAACAAGATCGCGGGGTTCTCCACCCATCTCATGAAGCGGATCCAGAAGGGTCCCGTGCGTGGAATCTCCCTGAAGCTGCAGGAGGAGGAACGCGAGCGTCGCATGGACTTCGTCCCCGATGTCTCCGCCATCAGGACCGACCAGATCGAGGTCGACAAGGAGACGCTCGACATGCTCGCCGCCCTCGGGATGTCCGAGGTTCCTGGCATCGTTCAGGTGGATCCTGTTGCCGTCCAGGCGCCCCTCGGCTTCGGCCGTGGCGGCCCTGGAAGGAGGTACTAA 423 0.6076 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKVLEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIRTDQIEVDKETLDMLAALGMSEVPGIVQVDPVAVQAPLGFGRGGPGRRY 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01902 140 PANTHER 40S RIBOSOMAL PROTEIN S17 1 140 - -
Gma02g01902 140 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Gma02g01902 140 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Gma02g01902 140 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Gma02g01902 140 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Gma02g01902 140 PANTHER 40S RIBOSOMAL PROTEIN S17 1 140 IPR001210 GO:0003735|GO:0005840|GO:0006412
Gma02g01902 140 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01902 Gma-Chr2 44098665 44099600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01902 1 140 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 82.979 1.02e-81 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01902 K02962 - gmx:100819067 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01902 02 44098665 44099600 Gma02g01902 02 44098665 44099600 ECH