Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01897 ATGAAGTTTTTTAATCTCTTGAAAAGCAGACATGTCAGATCCTGCTCCTCTCCTTCATCATGGGCCTGGCCATCCTGCCACCAACCCAAAACCCTCTCTTTCAGAGTCACCGCCACCAATACCAACAATAACAAAAACAACGATGATGATGACAACAACATGAGAGACATTAACTTAGCGTTAGTGTCACAAACTCCAGAATCGTTCTTCACCGAGTCACCAGACTCGGCGAGCTTCTCGACAACCTCGGAGTTGTCCCGTGGCGTGGACCCCATCGAGACGGTGATTCGCGGCCTGCGTTCGGATCGACTCTTCTTCGATCGGGACGATGCAAGCTTCATGTTAGAGGGCAAACCGACGACGACCAGCCACCTGGAGCCGTTCAAAAACAGCGTCGTTTTGACGATGGACTCGGAGGACCCTCACGTGGATTTCCGCAAGTCCATGGAGGAGATGGTGGAGACTCTCGGCGTCGAAGACTGGGAGAGTCTCGAGGACCTTCTGTGCTGGTACCTGCAGGCCAACGCCAAGAGCAACCATGAGTACATCATTGGCGCTTTCGTCGATTTGTTGTTCTATCTCGCTGTTCCAAATTCACCTTGCTCACAAGACTTTGAACATTCTCATTCTCGTCCTTCTTCTCCTTTATCGTTTTATAGTTCTTCTTCTTCTTCTTCTCCCTCATCTTCATGCAGCACTCGCTGTAATATAAAAGGTGAAGTGGAAGAGGAAGAGGAGGAGGTTGGT 747 0.498 MKFFNLLKSRHVRSCSSPSSWAWPSCHQPKTLSFRVTATNTNNNKNNDDDDNNMRDINLALVSQTPESFFTESPDSASFSTTSELSRGVDPIETVIRGLRSDRLFFDRDDASFMLEGKPTTTSHLEPFKNSVVLTMDSEDPHVDFRKSMEEMVETLGVEDWESLEDLLCWYLQANAKSNHEYIIGAFVDLLFYLAVPNSPCSQDFEHSHSRPSSPLSFYSSSSSSSPSSSCSTRCNIKGEVEEEEEEVG 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01897 249 ProSiteProfiles OVATE domain profile. 134 193 IPR006458 -
Gma02g01897 249 MobiDBLite consensus disorder prediction 204 249 - -
Gma02g01897 249 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 235 IPR038933 GO:0045892
Gma02g01897 249 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 133 194 IPR006458 -
Gma02g01897 249 MobiDBLite consensus disorder prediction 204 236 - -
Gma02g01897 249 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 235 - -
Gma02g01897 249 Pfam Transcriptional repressor, ovate 138 194 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01897 Gma-Chr2 44026741 44027487 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma02g01897 Ovate 1.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01897 - - gmx:100816044 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01897 02 44026741 44027487 Gma20g01087 20 37538076 37538795 ECH
Gma02g01897 02 44026741 44027487 Gma02g01897 02 44026741 44027487 ECH
Gma10g00714 10 8642533 8643336 Gma02g01897 02 44026741 44027487 GST
Gma19g01878 19 48010169 48010915 Gma02g01897 02 44026741 44027487 PCT
Gma03g01837 03 44389209 44390435 Gma02g01897 02 44026741 44027487 PCT
Gma02g01897 02 44026741 44027487 Gma19g01878 19 48010169 48010915 PCT
Gma02g01897 02 44026741 44027487 Gma03g01837 03 44389209 44390435 PCT