Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01892 ATGTCTAGTTCCAGAAAAAAACTGGTTCTGAATACCGTGTCCGTGAGCCTGGGCTGCGGCAGCTGCAGAAGGCCCGGGCTCCTCCGGCACATATTCCACCCGAAGCGGAGGCCCAAGAAGCCCGCGTACCAGGCCCACGGGTTTCATTGGGACGACACCGCGACGAGCAGCAGCACCACCAACGCCTCCACCGCTGCCACGTTCTCGCCATGCTACGCGGAGGCCTCGGCGCAGTTCAGCAACTACGGGCGAGGCGTGGCGGTGGAGAAGGACTCTGATGATCCATACCTGGACTTCAGGCACTCTATGCTGCAGATGATACTGGAGAATGAGATATACTCTAAGGATGATCTCAGGGAGCTTCTCAACTGTTTTCTTCAGCTCAATTCGCCGGACCACCATGGTGTTATAGTGAGAGCGTTCACTGAGATCTGGAATGGAGTTTTCTCCGTGAGGAGGTCTGGTTCTTCCACTGGGTTCCACCTCAACCGAGTAACATTATCCTGGCATCAATCTAGTGGATGA 525 0.5562 MSSSRKKLVLNTVSVSLGCGSCRRPGLLRHIFHPKRRPKKPAYQAHGFHWDDTATSSSTTNASTAATFSPCYAEASAQFSNYGRGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPDHHGVIVRAFTEIWNGVFSVRRSGSSTGFHLNRVTLSWHQSSG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01892 174 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gma02g01892 174 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 156 IPR038933 GO:0045892
Gma02g01892 174 ProSiteProfiles OVATE domain profile. 88 147 IPR006458 -
Gma02g01892 174 PANTHER TRANSCRIPTION REPRESSOR OFP6-LIKE 1 156 - -
Gma02g01892 174 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 86 146 IPR006458 -
Gma02g01892 174 Pfam Transcriptional repressor, ovate 92 148 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01892 Gma-Chr2 43978773 43979677 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma02g01892 Ovate 2.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01892 - - gmx:100818531 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01892 02 43978773 43979677 Gma02g01892 02 43978773 43979677 ECH
Gma10g00716 10 8688943 8689476 Gma02g01892 02 43978773 43979677 GST