Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01873 ATGTCCCATCTAAACGGCGCGTACTACGGCCCCTCCGTTCCGCCGCCGAAATCCTACCACCGCCCCTCCCGCGGCGGCCGCGACGGCTGCTGCTGCGGCTGCCTGAGCTGCTTCTGCGGCTGCATCTTCGACTGCATCCTGGGCCTCATCTGCAAGATCCTCACCACAATCCTCATCATCGTAGCAATACTCGGCTTTCTCTTCTGGTTCATCGTGCGCCCCAACGTGCTCAAATTCCACGTTACCGACGCGTCCCTCACGCGCTTCGACTACACCACCAACAACACTCTCCACTACGACCTCGCCCTCAACGTCTCGATCCGCAACCCGAACCGCAGGGTCGGCGTCTACTACGACCACATCGAAGCGCACGCGCTGTACCAGGATGTTTTGTTCGGGAACCAGACATTAGGGCCGTTCTTCCAGCACCACAAGAACACCACCTTCGTGAATCCCCTTTTCAAGGGCCAGCGCGTGACGCCACTCGCCGGGAACCAGGTCGAGGTGTTTGACAAGGAGAAGGGTTCGGGTGTTTACACCATCGATTTGAAGCTCTTTATGGTGGTTCGGTTCAAGTTCTTGCTGTTCAAGAGTGCGAGCGTGAAGCCCAAGATTCGGTGTGCGTTGCACGTGCCGCTGAAATCGCGTAACGCAACAACAACTATCTCCCCCGATGCTGCGTTTCAACCCACAGAGTGCGGTTGGGATTACGGGAAAAAATGGTGGATCCATTAG 735 0.5728 MSHLNGAYYGPSVPPPKSYHRPSRGGRDGCCCGCLSCFCGCIFDCILGLICKILTTILIIVAILGFLFWFIVRPNVLKFHVTDASLTRFDYTTNNTLHYDLALNVSIRNPNRRVGVYYDHIEAHALYQDVLFGNQTLGPFFQHHKNTTFVNPLFKGQRVTPLAGNQVEVFDKEKGSGVYTIDLKLFMVVRFKFLLFKSASVKPKIRCALHVPLKSRNATTTISPDAAFQPTECGWDYGKKWWIH 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01873 244 PANTHER OS05G0367900 PROTEIN 17 237 IPR044839 GO:0098542
Gma02g01873 244 Pfam Late embryogenesis abundant protein 104 207 IPR004864 -
Gma02g01873 244 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 17 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01873 Gma-Chr2 43424950 43426011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01873 71 219 SNARE and Associated Proteins AT1G32270 40.397 2.38e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01873 - - gmx:100814808 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01873 02 43424950 43426011 Gma02g01873 02 43424950 43426011 ECH
Gma10g00732 10 9128563 9129381 Gma02g01873 02 43424950 43426011 GST
Gma19g01888 19 48085968 48086801 Gma02g01873 02 43424950 43426011 PCT
Gma03g01851 03 44475044 44475955 Gma02g01873 02 43424950 43426011 PCT
Gma02g01873 02 43424950 43426011 Gma19g01888 19 48085968 48086801 PCT
Gma02g01873 02 43424950 43426011 Gma03g01851 03 44475044 44475955 PCT