Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01868 ATGCGTCTGGTGAGTTGGCTGCAACTAAGATCGATGGTTCTAACTATGAGGTTACGTATCTTGGTTAGAATTTCGCTAGAGATGAATTTGTGGTTAACGTCAAGGAACCTGAGCTTCTTCAAATTGGAGAGCAATTCAAGCTCAGTCGGGAATGATGGTGAACTCGGTAAGGGCGGAGAGGCTACCAACGATGGGGTCGAGCCGATCGGTGAGCGCTATGACCTTGTCAAAGTTGCAGGTTCCCAAGCCGTTGTGAGAGGGACCAAGGCCACCTCTCTGTCAATGCCTCCAAGACTAGATCCTCAAGCTCGGCGTGTGTCGCGAGCTTACCAACGCTATAATGGAAGCATTCATGAAGATCTGAATGATGAGAAGAAGGAAAATAGATCTGATTTTGAGAACTTTGAAGATGAAAGAAGAACAAGAATTGGATCTTTGAAGAAGAAAGCGCTCAACACATCCTCCAAGTTCAAGCATTCACTGGAGAAAAAAAGCAGCAGAAGGAAAAGCGATGGTTGTGTTAGCTCTGTTTCGATCGAAGATGTTCGGAATTTCAAGGAGCAGTTCCTGAAAGTGAGGAAGTTTGATATTGAAAGAGCAAAGCATATGTGGAATGATATGCTACAATGGAGGAAGGAGTTTGGTACTGACACTATTATGGAGATGTCTCCCTTTGAGGAAGCTCCTGAGGAGTTTGATCAGACCATATTTGTTGTACAAAAAAACAAAAGCATTGGACCTATTGAGGGGCTTGCTCTAAATTTTGTGAAGGACCAACAGAGGTAG 786 0.4415 MRLVSWLQLRSMVLTMRLRILVRISLEMNLWLTSRNLSFFKLESNSSSVGNDGELGKGGEATNDGVEPIGERYDLVKVAGSQAVVRGTKATSLSMPPRLDPQARRVSRAYQRYNGSIHEDLNDEKKENRSDFENFEDERRTRIGSLKKKALNTSSKFKHSLEKKSSRRKSDGCVSSVSIEDVRNFKEQFLKVRKFDIERAKHMWNDMLQWRKEFGTDTIMEMSPFEEAPEEFDQTIFVVQKNKSIGPIEGLALNFVKDQQR 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01868 261 Gene3D - 140 246 IPR036865 -
Gma02g01868 261 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 122 187 - -
Gma02g01868 261 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 188 230 - -
Gma02g01868 261 SUPERFAMILY CRAL/TRIO N-terminal domain 184 220 IPR036273 -
Gma02g01868 261 Coils Coil 118 138 - -
Gma02g01868 261 MobiDBLite consensus disorder prediction 47 66 - -
Gma02g01868 261 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH8 122 187 - -
Gma02g01868 261 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH8 188 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01868 Gma-Chr2 43251510 43254317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01868 220 261 C2H2 Transcription Factor Family AT1G50670 66.667 3.72e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01868 - - gmx:100784405 172.555