Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01864 ATGATGATGAAGAACCTTGTACTCTTCCTATGTTTGTGTTTCTTCACTCTCGTTGTTTCCGAAACGGACTCGAACGACGTGAAGATTCTGAACAGCTTCAAAAGAGGGTTGAATAACTCAGAGCTCTTACCATGGCCCGAAGAAGGAGGAGACCCGTGCGGGAGCCCTCCATGGAAATACATCTTCTGCAACGGCAACAGAGTCGCTCAGATTCAGACCAAGAACCTGGGCCTGGTGGGCCCACTCCCTCCAAACCTCAACGAACTCACCATGCTCGAGAATCTGGGTTTACAGAACAACAACCTTAACGGTCCTTTACCCTCCTTCAAGGGCTTAACCAATCTAAAATACATTTTTCTCGGTCACAACGACTTCGATTCGATCCCCGTAGATTTCTTCGAGGGATTGAAGAGTCTCGAGGTGTTGGCTTTGGATTACAACGAAAAACTAAATGCAAGTAATGGCGGGTGGAACTTCCCGGCAACGCTGGAGGATTCGGCGCAGCTGAGGAACTTGAGTTGCATGAGCTGTAATCTGGTGGGCCCCATTCCGGGGTTCTTTGGGGACATGGCGTCGCTGTCGGTGTTGCTGCTGTCGGGCAACAATTTAACCGGGGAGATTCCGGCGACGTTGAACGCCGTTCCGGCGTTGCAGGTTCTCTGGCTGAACAACCAGCGTGGAGAGGGACTCGGTGGGAAAATTGACGTCTTGGCGAGTATGGTTTCGTTGACGAGTTTGTTGCTTCGTGGGAACAGTTTTGAAGGGAGTGTACCTATGAACATTGGGGATTTGGTTTCTTTGAAGGATTTGGATCTTAATGGGAATGAGTTTGTTGGGTTGATTCCGAGTGGTTTGGGTGGAATGATATTGGATAAGTTGGATTTGAATAACAACCACTTCATGGGTCCGATCCCGGAATTTGCAGCGAGTAAAGTGAGTTATGAGAACAATGAATTTTGTGAGGCAAAGGCCGGGGTTATGTGTGCTTTTGAAGTGATGGTGTTGTTGGAGTTTCTTGGAGGGTTGGGGTATCCTTGGATTTTGGTTGATTCTTGGAGTGGAAATGACCCTTGTCACGGGCCATGGTTGGGGATAAGGTGCAATGGGGACGGAAAGGTGGACATGATTATTTTGGAAAAGTTTAATCTTAGTGGGACTTTGAGTCCTTCTGTTGCCAAGTTAGATTCTCTTGTTGAGATAAGGTTGGGAGGTAATGATATTAGTGGTACGATACCGAGTAATTGGACTAGTTTGAAATCTTTGACATTGTTGGATCTGAGTGGGAATAACATTTCGCGTCCCTTGCCGAGTTTTGGGAAAGGGTTGAAGCTTGTGATTGATGGGGATCCTCATGGAAGTGCCCCAGAAGGTTCTCTTTCTCTACCCGGGACTGGTTCGTCGTCTACAAAGGGTGAATCTCCTTCCACTGATAAGCATAATCCTAATCCATCTGAAGACTCTAGTCCCAATCCAAAGTCTAGTAGTTCTTTTGAGTCGAATAATTCTTCCAATGGGAAAAAAATAGTTCCAATTGTGGTTCCTATTGCAGGTGTTGCAGCTGCCGCTTTTGTGCTCATTCCGCTTTATGTGTATTGTTTCAGGAAGAAAAAGGGTGTCTCTGAGGGTCCAGGGTCATTGGTGATTCACCCTAGGGATGCTTCTGATCCGGACAACGTGCTGAAGATTGTTGTTGCTAACAACAGCAGTCGGAGTGTTTCCACGGTGACTGGAAGTGGGTCTGGGACTATGACTCGAAGTGGTGAGTCTCGTGTCATTGAAGCTGGGAACCTTGTGATATCGGTTCAGGTTCTTCGAAACGTGACCAAGAATTTTGCACGGGAGAACGAGGTTGGACGTGGTGGGTTTGGGGTCGTTTACAAGGGAGAACTGGAAGATGGGACTAAGATTGCGGTGAAACGAATGGAATCCGGTGTGATTACCAGCAAGGCTTTGGATGAATTTCAGTCTGAGATTGCAGTTCTATCTAAAGTCCGGCACCGGCATTTGGTTTCTCTTTTGGGTTATTCAGTTGAAGGTAAAGAAAGGATTCTAGTTTATGAGTATATGCCACAAGGGGCTCTCAGTATGCATCTCTTCCATTGGAAGAGCTTACAACTGGAGCCACTGTCTTGGAAGAGGAGGCTCAACATTGCCTTGGATGTTGCTAGAGGAATGGAGTATCTTCATAGTCTGGCTCATCAGATCTTCATTCACAGAGATCTTAAGTCATCAAATATTTTACTTGGGGATGACTTTAGAGCAAAAGTCTCAGATTTTGGATTGGTAAAACTTGCTCCTGATGGCAAAAAATCTGTAGTGACCCGACTTGCTGGTACATTTGGATACTTGGCACCAGAATATGCAgTGACTGGAAAAGTCACTACCAAAGCAGATGTTTTCAGTTTTGGCGTTGTCCTAATGGAGCTGCTAACTGGATTAATGGCACTTGACGAGGATAGACCCGAGGAAACCCAATACTTGGCGTCGTGGTTCCGGCATATAAAATCAGACAAGGAGAAACTAATGGCTGCTATTGACCCGGCCCTCGACATAAAGGAAGAAATGTTCGATGTCGTCTCCATTGTTGCTGAGCTAGCTGGGCACTGCACTACCAGAGAACCAAACCAAAGGCCAGATATGAGTCATGCTGTGAATGTTCTTTCGCCACTTGTTCAAAAATGGAAACCATTAGATGATGACACTGAGGAGTATGCTGGCGTAGATTACAGTCTTCCCCTTAACCAAATGGTGAAGGAGTGGCAGGAGACAGAAGGAAAGGACCTGAGCTATGTGGACCTACAAGACAGTAAGAGTAGTATCCCTGAAAGGCCTACTGGGTTAGCCGAGTCTTTTACTTCCATTGATGGCCGATGA 2874 0.4645 MMMKNLVLFLCLCFFTLVVSETDSNDVKILNSFKRGLNNSELLPWPEEGGDPCGSPPWKYIFCNGNRVAQIQTKNLGLVGPLPPNLNELTMLENLGLQNNNLNGPLPSFKGLTNLKYIFLGHNDFDSIPVDFFEGLKSLEVLALDYNEKLNASNGGWNFPATLEDSAQLRNLSCMSCNLVGPIPGFFGDMASLSVLLLSGNNLTGEIPATLNAVPALQVLWLNNQRGEGLGGKIDVLASMVSLTSLLLRGNSFEGSVPMNIGDLVSLKDLDLNGNEFVGLIPSGLGGMILDKLDLNNNHFMGPIPEFAASKVSYENNEFCEAKAGVMCAFEVMVLLEFLGGLGYPWILVDSWSGNDPCHGPWLGIRCNGDGKVDMIILEKFNLSGTLSPSVAKLDSLVEIRLGGNDISGTIPSNWTSLKSLTLLDLSGNNISRPLPSFGKGLKLVIDGDPHGSAPEGSLSLPGTGSSSTKGESPSTDKHNPNPSEDSSPNPKSSSSFESNNSSNGKKIVPIVVPIAGVAAAAFVLIPLYVYCFRKKKGVSEGPGSLVIHPRDASDPDNVLKIVVANNSSRSVSTVTGSGSGTMTRSGESRVIEAGNLVISVQVLRNVTKNFARENEVGRGGFGVVYKGELEDGTKIAVKRMESGVITSKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGKERILVYEYMPQGALSMHLFHWKSLQLEPLSWKRRLNIALDVARGMEYLHSLAHQIFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGKKSVVTRLAGTFGYLAPEYAVTGKVTTKADVFSFGVVLMELLTGLMALDEDRPEETQYLASWFRHIKSDKEKLMAAIDPALDIKEEMFDVVSIVAELAGHCTTREPNQRPDMSHAVNVLSPLVQKWKPLDDDTEEYAGVDYSLPLNQMVKEWQETEGKDLSYVDLQDSKSSIPERPTGLAESFTSIDGR 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01864 957 MobiDBLite consensus disorder prediction 935 957 - -
Gma02g01864 957 MobiDBLite consensus disorder prediction 459 502 - -
Gma02g01864 957 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 4 957 - -
Gma02g01864 957 Gene3D Ribonuclease Inhibitor 23 327 IPR032675 -
Gma02g01864 957 SUPERFAMILY L domain-like 22 305 - -
Gma02g01864 957 SUPERFAMILY L domain-like 331 442 - -
Gma02g01864 957 ProSitePatterns Protein kinases ATP-binding region signature. 617 639 IPR017441 GO:0005524
Gma02g01864 957 ProSiteProfiles Protein kinase domain profile. 611 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01864 957 SUPERFAMILY Protein kinase-like (PK-like) 593 896 IPR011009 -
Gma02g01864 957 Pfam Protein tyrosine and serine/threonine kinase 614 886 IPR001245 GO:0004672|GO:0006468
Gma02g01864 957 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Gma02g01864 957 Pfam Leucine rich repeat N-terminal domain 335 368 IPR013210 -
Gma02g01864 957 PANTHER OSJNBA0070M12.3 PROTEIN 4 957 - -
Gma02g01864 957 MobiDBLite consensus disorder prediction 453 502 - -
Gma02g01864 957 SMART serkin_6 611 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01864 957 Pfam Leucine rich repeat 92 147 IPR001611 GO:0005515
Gma02g01864 957 Gene3D Phosphorylase Kinase; domain 1 575 688 - -
Gma02g01864 957 Gene3D Transferase(Phosphotransferase) domain 1 689 908 - -
Gma02g01864 957 SMART LRR_typ_2 264 287 IPR003591 -
Gma02g01864 957 SMART LRR_typ_2 112 135 IPR003591 -
Gma02g01864 957 SMART LRR_typ_2 190 214 IPR003591 -
Gma02g01864 957 SMART LRR_typ_2 418 441 IPR003591 -
Gma02g01864 957 CDD STKc_IRAK 617 890 - -
Gma02g01864 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Gma02g01864 957 Gene3D Ribonuclease Inhibitor 331 451 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01864 Gma-Chr2 43176773 43180817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01864 80 924 Receptor kinase-like Gene Family AT1G55610 29.484 3.93e-79 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Gma02g01864 PK_Tyr_Ser-Thr 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01864 - - gmx:100803759 1778.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01864 02 43176773 43180817 Gma02g01864 02 43176773 43180817 ECH
Gma10g00750 10 9765032 9768816 Gma02g01864 02 43176773 43180817 GST
Gma03g01857 03 44510782 44514599 Gma02g01864 02 43176773 43180817 PCT
Gma02g01864 02 43176773 43180817 Gma03g01857 03 44510782 44514599 PCT