Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01858 ATGGCGACATATTTTCATAGTAACTCCGAAATTCAAGCCGGCGCTGACGGCCTTCAAACTCTCGTACTAATGAACCCCGGCTACGTCCAATACTCCGATACGCCGCCACCGCCGCACGGCGGAAACCTCGTATTCCTCAACTCCGCCGCCGGCAATGCCTCCCTACAAAACCTCTCACACGCGCCGCCACCTCACACGCAGCAATTCGTCGGCGTGCCGCTATCTGCCGCCGCCGCGCACGAACCTCCGCCGCCGCCGGCGTCCATGCACCACGACGTTTCCGCCCTGCATGGCTTCCTGCCGCGCATGCAGTACAGCCTCTGGAACACAATTGACCCCAACGCGGCGGCGCGTGAGGCTCCACGCGCCACCCAGGGGTTGTCGCTGAGCCTGCACGGGGAGGAGGTGCGCGCGTCTCCGTCGTTGGCTTCCGGGGCCTCCAACGGCGGCGGCGTGGCGGGGATTCAGAGCGTGCTGTTGAGCTCCAAGTACTTGAAGGCCACGCAGGAACTTCTGGACGAGGTTGTTAATGTTAACAGCGGAATTAAGGTAGAACAAACGAAGAAGCTGTGCTTCGAGAAAACTAAGGTTGTGGGAGAATCATCAACCGCCGCTAGTGGTGGTGACGGTTCTGTTGGTGGAGAGGGAAGTGGGAAGCGCAGCTCTGAATTGTCAACTACGGAGAGACAAGAAATTCAGATGAAGAAAGCCAAGCTAATCAACATGCTTGATGAGGTGGAGCAAAGGTACAGGCAGTACCACAGCCAGATGCAGATTGTGATATCCTCTTTCGAGCAAGCTGCTGGGATAGGCTCAGCGAGGACGTACACTGCTCTAGCATTGCAAACAATTTCAAAGCAATTTCGGTGTCTGAAGGATGCAATAACGGGGCAAATCAGAGCTGCAAACAAGAGTTTGGGGGAAGAGGATTGCTTTGGTGCTAAAATTGAAGGGTCTAGGCTCAAATATGTGGATCATCATCTAAGGCAACAGAGAGCTATTCAACAATTGGGAATGATCAATCACAATGCTTGGAGACCCCAGAGAGGATTGCCTGAGAGATCGGTTTCTGTTCTGCGTGCTTGGCTCTTTGAACACTTTCTCCACCCTTATCCCAAGGACTCGGACAAACACATGCTTGCAAAACAAACAGGGCTCACCAGAAGCCAGGTTTCAAATTGGTTCATAAATGCTCGAGTTCGGCTTTGGAAGCCAATGGTGGAGGAAATGTACTTGGAGGAGATGAAAGATCATGAACTAAATGGTTCTGAGGAGAAATCAAGCAAGAATGGTGAAGATCCTGCTACAAAAACATCAACTCCACAAGAGAAACGTGCTGCCTCTGAAATTGAATCCAAAAGTTTCAATTCCAAACAAGATGTTTCCAAAAACCAGAACACTCCTATAGTTTCAACTACTCCACCATCAACATCACCTGTAGGGGGAAGTGTTAAGAACCAATCAGGATTCAGTTTCATGGGGTCATCAGAACTTGATGGAATCACACAAGGAAGTCCTAAAAAGCCAAGGAACCATGAAATTCTACGCTCTCCAAACCGTGTCCCTTCAATCAACATGGATGTGAAAGCCAATGAGGCAAACAATGAGCAACAACTCTCTATGGATCTTGAGAGGCAGAATAGGGATGGCTACACTTTCATGGGGAACCAAACAAACTTCATTAGTGGTTTTGGACAATACCCTATGGAGGAAATTGGAACACACCAAAGTTTTCTCCCAAACCAAAACATTCAATTAGGAAGAGGGTTGGACATTGGTGAACCAAACCAGTTTGGTGCATTGAATAATTCCACTTCTCACTCTTCAGCAGCATTTGAGAGCATCAACATGCAGAACCCAAAGAGTGGTTTCTGCCTTCGTGTGGTGAAACTAAATGGTGTTGTCGTGTTGGTTCATAAGGAGTTCTTAGCAAAGGCACAAGTGGAGCAATGTGGTAGGAATGCTTGGCTACCTAAAGAAGATCCTCCTCTTTTTGCAAATGGTAGATTGCGTTAA 2016 0.4921 MATYFHSNSEIQAGADGLQTLVLMNPGYVQYSDTPPPPHGGNLVFLNSAAGNASLQNLSHAPPPHTQQFVGVPLSAAAAHEPPPPPASMHHDVSALHGFLPRMQYSLWNTIDPNAAAREAPRATQGLSLSLHGEEVRASPSLASGASNGGGVAGIQSVLLSSKYLKATQELLDEVVNVNSGIKVEQTKKLCFEKTKVVGESSTAASGGDGSVGGEGSGKRSSELSTTERQEIQMKKAKLINMLDEVEQRYRQYHSQMQIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQIRAANKSLGEEDCFGAKIEGSRLKYVDHHLRQQRAIQQLGMINHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKDHELNGSEEKSSKNGEDPATKTSTPQEKRAASEIESKSFNSKQDVSKNQNTPIVSTTPPSTSPVGGSVKNQSGFSFMGSSELDGITQGSPKKPRNHEILRSPNRVPSINMDVKANEANNEQQLSMDLERQNRDGYTFMGNQTNFISGFGQYPMEEIGTHQSFLPNQNIQLGRGLDIGEPNQFGALNNSTSHSSAAFESINMQNPKSGFCLRVVKLNGVVVLVHKEFLAKAQVEQCGRNAWLPKEDPPLFANGRLR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01858 671 SMART prehox3 153 297 IPR006563 -
Gma02g01858 671 PANTHER HOMEOTIC PROTEIN, PUTATIVE-RELATED 7 604 - -
Gma02g01858 671 CDD homeodomain 345 406 IPR001356 GO:0003677
Gma02g01858 671 Coils Coil 229 256 - -
Gma02g01858 671 MobiDBLite consensus disorder prediction 201 229 - -
Gma02g01858 671 MobiDBLite consensus disorder prediction 418 520 - -
Gma02g01858 671 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 604 - -
Gma02g01858 671 MobiDBLite consensus disorder prediction 452 502 - -
Gma02g01858 671 ProSiteProfiles 'Homeobox' domain profile. 342 405 IPR001356 GO:0003677
Gma02g01858 671 SUPERFAMILY Homeodomain-like 346 412 IPR009057 -
Gma02g01858 671 Gene3D - 341 418 - -
Gma02g01858 671 SMART HOX_1 345 409 IPR001356 GO:0003677
Gma02g01858 671 MobiDBLite consensus disorder prediction 418 432 - -
Gma02g01858 671 Pfam Associated with HOX 158 296 IPR006563 -
Gma02g01858 671 Pfam Homeobox KN domain 362 401 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01858 Gma-Chr2 42975636 42979704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01858 1 572 Homeobox Transcription Factor Family AT2G35940 50.698 1.13e-154 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gma02g01858 POX 1.2e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01858 - - gmx:100810851 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01858 02 42975636 42979704 Gma02g01858 02 42975636 42979704 ECH