Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01855 ATGCTTTTCCGTTTCAACTTCCCCTTCACGATCCGATCCTTCTTCATACCCCCTCCATGCATTCTTCTTTTCGTTCTCTTCTCTTTCACGTGCTTCAATTCCACAGAAGCTTATGATCCACTTGATCCAAATGGAAATATCACAATCAAATGGGATATTATAAGCTGGACACCTGATGGCTATGCTGTTGTTACAATGTACAACTTCCAACAATATCGTCATATCTCAGTGCCTGGGTGGTCACTAGGATGGACATGGGCAAAGAAGGAGGTAATATGGAGCATGATAGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAATATAAGGCAAACATCCCACATTGCTGTAAAAAGAACCCTATAGTTGTTGATTTACTTCCCGGAACACCTTACAACCAACAAATTTCAAACTGCTGCAAAGGTGGTGTACTCAGCTCGTGGGCACAGGACCAATCCAAGGCGGTTGCAGCATTTCAAGTCAGTGTAGGTAGTGCCAGTACCACTAACAAAACTGTCAAAGTGCCAAAAGATTTCACACTGAAAGCGCCCGGACCCGGTTACACGTGTGGGCCGGCAACAATTGTGAAACCAACTCAATTTTTACAACCAGACAAAAGGAGAGTGACCCAAGCACTTATGACATGGAATGTGACATGCACATATTCACAATTTCTTGCTCAGAGAACACCCAGTTGCTGTGTCTCGCTCTCATCTTTCTATGACAATACAGTTGTACCCTGCACTACATGTGCATGTGGCTGCCAGGGCAACTCATCTCAATCAGGAGAATGTGTAGATCCAGATTCACCACATTTGCAATCAGTTGTTTCCAACGCTGGACCTGGAAAGAGTAGTATCACACCTTTGGTTCGATGCACTCGTCATATGTGCCCAATCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTCACTGTTACTAATTTCAATTACGGGATGAATTATTCTGATTGGAACTTGGTTGTTCAACATCCAAACTTTGACAATCTGACCCAACTTTTCAGTTTCAACTACAAAGCAATAACTCCCTACGGGTCAATAAATGATACAGCAATGCTTTGGGGACTTAAGTTCTACAATGATTTTCTCATGCAAGCTGGCCCTCTTGGTAATGTACAATCAGAGCTACTATTCAGAAAGGATAAATCAACCTTCACTTTTGACAAGGGCTGGGCCTTCCCTCGGAGAGTCTATTTCAATGGCGACGTTTGTGTGATGCCGCCACCTGATGCTTATCCATGGTTACCTAATGCGGGTTCCAGGCAAATAGTTTCCCTGCTTGCTTTGGTGATGTCCTCTTTGGTAGCCTTGGTATTATATGCAGATACTTAA 1374 0.4381 MLFRFNFPFTIRSFFIPPPCILLFVLFSFTCFNSTEAYDPLDPNGNITIKWDIISWTPDGYAVVTMYNFQQYRHISVPGWSLGWTWAKKEVIWSMIGGQTTEQGDCSKYKANIPHCCKKNPIVVDLLPGTPYNQQISNCCKGGVLSSWAQDQSKAVAAFQVSVGSASTTNKTVKVPKDFTLKAPGPGYTCGPATIVKPTQFLQPDKRRVTQALMTWNVTCTYSQFLAQRTPSCCVSLSSFYDNTVVPCTTCACGCQGNSSQSGECVDPDSPHLQSVVSNAGPGKSSITPLVRCTRHMCPIRVHWHVKLNYKEYWRVKVTVTNFNYGMNYSDWNLVVQHPNFDNLTQLFSFNYKAITPYGSINDTAMLWGLKFYNDFLMQAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRVYFNGDVCVMPPPDAYPWLPNAGSRQIVSLLALVMSSLVALVLYADT 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01855 457 PANTHER COBRA-LIKE PROTEIN 16 456 - -
Gma02g01855 457 PANTHER PROTEIN COBRA 16 456 IPR006918 GO:0010215|GO:0031225
Gma02g01855 457 Pfam COBRA-like protein 62 223 IPR006918 GO:0010215|GO:0031225
Gma02g01855 457 PIRSF COBRA 13 456 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01855 Gma-Chr2 42842727 42846790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01855 21 456 COBRA Gene Family AT3G02210 72.603 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01855 - - gmx:100797383 964.526