Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01853 ATGAGCTTCCTCAGTATCACCTTCATAACACTCTTCCTCCTTTCCCACCACTACATACACCACCCCCAAGCGAATACCCCAGTGGACCGTTTTACCATCAATTGTGGCGCCTCCGTGATATCCTCCGACGGTGAAAGAACTTGGATGGGGGACACAGACTCAATGCTTTTATCCAGTCAAGATAGCACCGTTTCTGCTAAACCAACATCACAATCTCCATCTACCAATCATGTTCCCTTTACCACTGCACGCTTGTCACGTTCCCAATTCAACTACTCCTTCCCCGTTACCCCAGGCCCCAAATTCCTTCGTCTCTTCTTCTACCCAGCTTCTTATCCTTCCTTTCCCCACACCGATTCCTCCTTCAAAGTTCAATGCAACCAATTTCTTCTCCTCGACAGTTTTAATGCCTCTTTAAACGTCGATGCTGTAAAAAAGGAAACCATCTTCAGAGAATACATCGTCTATGTGGGCGACAATCAGATGCTTATCCTCAGCTTCACTCCGTTCCAACCAAACTCCTATGCTTTCATCAATGGAATCGAGGTCTTTTCCATGCCAAGCTACCTGTATTACACGTCAGCTACCGACACAGGATTCACGTTTGTGGGAAGTGGCACACTATTCAGCATCCAAAGCAGTGCTGTATTGGAGACATATTATAGAATCAAAGTGGGAGGCCAAGGAATCTCGCCTGGAAACGATACTGGTTTGTTCAGGAACTGGATTGGTCACGATGAAGATTATTTAATTACACATAATCTAAAGAATAATCTACCAGGCGACACGGATGCTAAGATGAACATAATTGTGAATCCTGATTACGTGGCACCCAAAGAACTTTATAGTATAGCACGTGACATGGGATCAAATGCCACTCTGAACAAAATCAGCAACCTGATTTGGGAGTTCCCTGTTGATTCTGGCTGCACCTACATGATAAGGCTCCACTTTTGCGAGCTTGATCCGCATGTTTATGACATCGGTGATAGGGTGTTCTTCATTTACATAGCAAGCCAGTTGGCCGAGAGTGGCGCTGATGTTATGAGCTGGAGCCAGAAACAGAAAGGTCTGGCTGTGTACAAAGACTATGCCATTTTGATTCCCAAGAATGATACTGAGAAAAAGGTTAATCTGTCGCTCCAGATGCATCCTTATCAAAGTAGTTGGGATACCGAATACTCCGGCCCTTTCTTGAATGGTCTCGAGATATTCAAAATCAGCGACTTTCACTTGCCCGTCCAAGAAGGACATGACAGCATGCTTCCTGTCACCTTGTGGGTGGTATCTGGTGTTTTCTTTGTTTTGTTTCTCTTCATATCGGCAACCTACGAGCGCCGTCAACTCTTGCTTTCCACGAACAAGTCAATCAACACGGAGGATTCTTCTTTGCCATCAGATGACTCCCATCTCTGTCGTCGCTTCTCCATCGTTGAGATTAAAGTTGCAACCAAAAACTTTGATGACGTCTTAATTGTCGGCGTCGGGGGATTTGGCCATGTCTACAAGGGCTACATTGACGGTAGTTCCAACCCTGTGGCCATCAAGCGCCTCAAACCGGGTTCGCAACAGGGGGCTCGTGAGTTTCTGAATGAAATTGAGATGCTTTCAGAGCTCCGCCATCGCCATCTCGTCTCTCTCATCGGCTACTGCAGTGATGACAATGAGATGATACTAGTCTACGATTTCATGACACGTGGCAATCTCCGTGATCATCTCTATGACACCGATAATCCCCCTCTCTCATGGAAGCAAAGATTGCAGATTTGCATTGGTGCTGCGCGCGGGCTGCGTTATCTTCACAGTGGCGCGAAGCACATGATCATCCACCGTGATGTGAAAACAACCAACATCTTGTTGGATGAGAAGTGGGTGGCCAAGGTTTCAGACTTCGGCCTATCCAGAATTGGGCCCACGGACATGTCCAAATCCCATGTCAGCACTGCTGTGAAAGGAAGTTTTGGATATTTAGACCCAGAGTATTATAATCGGCAACGTTTGACGGAGAAGTCTGACGTATACTCTTTTGGGGTTGTGCTGTTTGAGATACTGTGTGCTCGTCCACCTCTAATCCACACTGCAGAGCCTGAAGAATTATCGCTAGCTAATTGGGCTAGGTACTGTTACCAAAGTGGGACCCTGGTGCAAATTGTGGACCCCATGTTGAAGGGAAGCATCGTGCCTGAGTGCTTTACCAAGTTTTGCGAGATCGGGGTGAGTTGTTTGTTACAAGATGGGATGCATAGACCGTCGATGAATGATGTCGTTTCAATGCTGGAGTCTGCACTGCAGCTGCAAGAGGGAGTGGAGCAATTAAAAAATGTTGGTATTGTTACTGTCCAAGTTCATGAAGAAAGAAAGGGAAATGGTGACAATGTCTTTAATAGCAATGAGCATGACTACCATTTCAAGGATAGTGATACATTGCTCCGGTTTCTCCGAGATAATCGACCCAAAGACATGGTGACCAAATGGAATTAA 2481 0.4607 MSFLSITFITLFLLSHHYIHHPQANTPVDRFTINCGASVISSDGERTWMGDTDSMLLSSQDSTVSAKPTSQSPSTNHVPFTTARLSRSQFNYSFPVTPGPKFLRLFFYPASYPSFPHTDSSFKVQCNQFLLLDSFNASLNVDAVKKETIFREYIVYVGDNQMLILSFTPFQPNSYAFINGIEVFSMPSYLYYTSATDTGFTFVGSGTLFSIQSSAVLETYYRIKVGGQGISPGNDTGLFRNWIGHDEDYLITHNLKNNLPGDTDAKMNIIVNPDYVAPKELYSIARDMGSNATLNKISNLIWEFPVDSGCTYMIRLHFCELDPHVYDIGDRVFFIYIASQLAESGADVMSWSQKQKGLAVYKDYAILIPKNDTEKKVNLSLQMHPYQSSWDTEYSGPFLNGLEIFKISDFHLPVQEGHDSMLPVTLWVVSGVFFVLFLFISATYERRQLLLSTNKSINTEDSSLPSDDSHLCRRFSIVEIKVATKNFDDVLIVGVGGFGHVYKGYIDGSSNPVAIKRLKPGSQQGAREFLNEIEMLSELRHRHLVSLIGYCSDDNEMILVYDFMTRGNLRDHLYDTDNPPLSWKQRLQICIGAARGLRYLHSGAKHMIIHRDVKTTNILLDEKWVAKVSDFGLSRIGPTDMSKSHVSTAVKGSFGYLDPEYYNRQRLTEKSDVYSFGVVLFEILCARPPLIHTAEPEELSLANWARYCYQSGTLVQIVDPMLKGSIVPECFTKFCEIGVSCLLQDGMHRPSMNDVVSMLESALQLQEGVEQLKNVGIVTVQVHEERKGNGDNVFNSNEHDYHFKDSDTLLRFLRDNRPKDMVTKWN 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01853 826 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 18 409 - -
Gma02g01853 826 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 450 783 - -
Gma02g01853 826 ProSitePatterns Protein kinases ATP-binding region signature. 493 516 IPR017441 GO:0005524
Gma02g01853 826 Gene3D Transferase(Phosphotransferase) domain 1 564 782 - -
Gma02g01853 826 PANTHER OS07G0166700 PROTEIN 450 783 IPR045272 GO:0004714|GO:0006468
Gma02g01853 826 PANTHER OS07G0166700 PROTEIN 18 409 IPR045272 GO:0004714|GO:0006468
Gma02g01853 826 SUPERFAMILY Protein kinase-like (PK-like) 470 763 IPR011009 -
Gma02g01853 826 Pfam Malectin-like domain 33 407 IPR024788 -
Gma02g01853 826 ProSiteProfiles Protein kinase domain profile. 487 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01853 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Gma02g01853 826 Pfam Protein tyrosine and serine/threonine kinase 493 759 IPR001245 GO:0004672|GO:0006468
Gma02g01853 826 Gene3D Phosphorylase Kinase; domain 1 472 563 - -
Gma02g01853 826 SMART serkin_6 487 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01853 826 CDD STKc_IRAK 493 760 - -
Gma02g01853 826 Gene3D - 30 187 - -
Gma02g01853 826 Gene3D - 216 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01853 Gma-Chr2 42789661 42792141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01853 26 771 Receptor kinase-like Gene Family AT3G51550 48.939 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma02g01853 Malectin_like 4.2e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01853 - - gmx:100796320 1674.45