Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01839 ATGAACAACACAACCGATTCCGGATTCCTCGGGTCCAACAACATAAGTGGCTTTGGCATGGGGATAGGAATCTCAATTGGGATTCTTCTGCTCATCACAACCATCACACTCACCTCCTACTTCTGCACCAGGGCACAAGTGCCAACTCCTCCAAGGAGAAGAGGAACAAGTAATTCCAATCCACAATTCCTTGAGCCACACCACACAATAGTTGATGTTGGCCTTGATGAAGCCACAATCATGAACTACCCCAAAATGCTCTACTCTGAAGCCAAGCTAAGGAAATCTGATTCCACTTCAACAAGCTGCTCCATATGTCTTGGAGATTACAAAGGTTCTGATTTGCTAAGGGTGTTGCCTGATTGTGACCATGTCTTTCACCTCAAGTGCATAGACCCTTGGCTGAGGCTGCATCCAACTTGTCCTCTCTGCAGAACATCACCAATTCCGACACCTCTCTCAACTCCTCTGGCCGAAGTGATCCCTTTAGCAACCAGGCGAGATTAA 507 0.4714 MNNTTDSGFLGSNNISGFGMGIGISIGILLLITTITLTSYFCTRAQVPTPPRRRGTSNSNPQFLEPHHTIVDVGLDEATIMNYPKMLYSEAKLRKSDSTSTSCSICLGDYKGSDLLRVLPDCDHVFHLKCIDPWLRLHPTCPLCRTSPIPTPLSTPLAEVIPLATRRD 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01839 168 SMART ring_2 103 144 IPR001841 -
Gma02g01839 168 Pfam Ring finger domain 102 145 IPR001841 -
Gma02g01839 168 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Gma02g01839 168 CDD RING-H2_PA-TM-RING 103 145 - -
Gma02g01839 168 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 166 IPR045899 -
Gma02g01839 168 SUPERFAMILY RING/U-box 80 150 - -
Gma02g01839 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 149 IPR013083 -
Gma02g01839 168 PANTHER RING-H2 FINGER PROTEIN ATL70-LIKE 3 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01839 Gma-Chr2 42490312 42490843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01839 7 165 C3H Transcription Factor Family AT2G35910 61.875 7.13e-56 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01839 - - gmx:121172638 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00769 10 10254996 10255951 Gma02g01839 02 42490312 42490843 GST