Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01820 ATGGGAAACAACTGTGTTGGATCGAGAACCTCTTCTTCTAAAGACGGAACAAATGGCTCTTCTAATTCAAGTTCATTCTGGTGGTCACGTGGACACAAGAAAGATGCTTCTCATGCACACAAAAGTGGCAAAAAGAGTGCAAAAGCCGCAGAAACTGTTCAAAACAAGCCTCCGGAGATGGTGAAAATCGAGAGGGAGGATGTGAAGCCTCCTCATCAATCCAAAGAGACTAAACCGCCTTCGGAAGAAACAAAGGAGCAGCCAACAAAACCAAAGAGGCCACACAATGTGAAGAGGCTAGCAAGTGCAGGCCTCAAAACAGATTCTGTTTTGCAACGAAAAACCGGTAACCTTAAGGAGTTTTACAATTTGGGACCAAAGCTTGGACAAGGCCAGTTTGGAACCACTTTCCTTTGTGTGGAGAAGATCACTGGGAAAGAGTATGCATGCAAATCAATATTGAAGAGGAAGCTTTTGACAGATGAGGATGTGGAGGATGTAAGGAGGGAGATTCAGATAATGCACCACTTGGCTGGGAGTCCTAACGTGATCTCCATCAAGGAGGCTTTCGAGGACGCTGTCGCGGTTCATGTTGTTATGGAGCTCTGTGCAGGGGGTGAGTTGTTTGATAGGATTGTGGAAAGGGGGCATTACACTGAAAGAAAGGCTGCTAAGCTTGCAAGGACTATAGTTGGTGTGATTGAGTCTTGCCACTCCCTTGGAGTGATGCATAGGGATCTTAAGCCTGAGAATTTTCTCTTTGTTAATCAGCAAGAAGAATCCCCTCTTAAGGCAATAGATTTTGGACTGTCTGCTTTTTTCAAACCAGGTGAAATTTTTGGTGATGTAGTAGGAAGTCCTTATTATGTAGCACCTGAAGTTCTACGTAAGCGTTATGGCCCCGAAGCAGATGTATGGAGTGCTGGTGTCATAATCTACATTCTCTTAAGTGGGGTGCCTCCATTTTGGGGTGAATCGGAGCAAGACATATTCGAGGCGATTTTGCATTCTGATCTTGATTTCTCATCGGATCCTTGGCCTGCTATATCTGAAAGTGCAAAAGACTTGGTTAGGAAGGTGCTTGTCAGAGATCCTACTAAAAGGATAACAGCTTATGAAGTTCTTCGTCACCCCTGGATTCAAGTTGATGGAGCTGCTCCAGACAAACCTCTGGATTCTGCAGTTTTGAGTCGCCTGAAGCAGTTTTATGCAATGAATAAACTCAAGAAAATGGCTCTCAGAGTTATAGCACAGAATCTTTCTGAAGAAGAAATTGCAGGGTTGAAAGAAATGTTTAAAATGATAGACACAGACAACAGTGGTCAAATTACATTTGAAGAACTCAAGGTTGGACTGAAAATGTTTGGTGCTAATCTCAATGAATCTGAAATTTACGACCTTATGCAAGCAGCTGACGTTGATAACAGTGGCACAATTGAATATGGAGAATTCATAGCTGCAACATTGCATCTAAACAAGGTTGACAGGGAAGATCATTTAGTTGCGGCTTTCGCTTATTTTGATAAAGATGGAAGTGGATACATCACTCAAGATGAGCTTCAACAAGCTTGTGAAGAATTTGGCGTTGGAGATGTCCGCTTGGAGGAAATGATCCGAGAAGCTGATCAAGATAATgatggaagaatagactacaatgaatttgtggctatgatgcagaaaggccatgcagatttggAGTTGGTAGAGAGGACTTTTCAATGGGTATTTGCCATGCTTTACCGTACACATGGAGTATAA 1758 0.4141 MGNNCVGSRTSSSKDGTNGSSNSSSFWWSRGHKKDASHAHKSGKKSAKAAETVQNKPPEMVKIEREDVKPPHQSKETKPPSEETKEQPTKPKRPHNVKRLASAGLKTDSVLQRKTGNLKEFYNLGPKLGQGQFGTTFLCVEKITGKEYACKSILKRKLLTDEDVEDVRREIQIMHHLAGSPNVISIKEAFEDAVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVGVIESCHSLGVMHRDLKPENFLFVNQQEESPLKAIDFGLSAFFKPGEIFGDVVGSPYYVAPEVLRKRYGPEADVWSAGVIIYILLSGVPPFWGESEQDIFEAILHSDLDFSSDPWPAISESAKDLVRKVLVRDPTKRITAYEVLRHPWIQVDGAAPDKPLDSAVLSRLKQFYAMNKLKKMALRVIAQNLSEEEIAGLKEMFKMIDTDNSGQITFEELKVGLKMFGANLNESEIYDLMQAADVDNSGTIEYGEFIAATLHLNKVDREDHLVAAFAYFDKDGSGYITQDELQQACEEFGVGDVRLEEMIREADQDNDGRIDYNEFVAMMQKGHADLELVERTFQWVFAMLYRTHGV 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01820 585 ProSiteProfiles EF-hand calcium-binding domain profile. 423 458 IPR002048 GO:0005509
Gma02g01820 585 SUPERFAMILY EF-hand 419 560 IPR011992 -
Gma02g01820 585 CDD EFh 428 487 IPR002048 GO:0005509
Gma02g01820 585 CDD STKc_CAMK 121 379 - -
Gma02g01820 585 MobiDBLite consensus disorder prediction 1 105 - -
Gma02g01820 585 Gene3D - 387 564 - -
Gma02g01820 585 ProSiteProfiles EF-hand calcium-binding domain profile. 533 564 IPR002048 GO:0005509
Gma02g01820 585 MobiDBLite consensus disorder prediction 1 30 - -
Gma02g01820 585 ProSitePatterns EF-hand calcium-binding domain. 542 554 IPR018247 -
Gma02g01820 585 Pfam Protein kinase domain 122 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01820 585 ProSiteProfiles Protein kinase domain profile. 122 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01820 585 Pfam EF-hand domain pair 428 488 IPR002048 GO:0005509
Gma02g01820 585 Pfam EF-hand domain pair 500 559 IPR002048 GO:0005509
Gma02g01820 585 ProSiteProfiles EF-hand calcium-binding domain profile. 459 494 IPR002048 GO:0005509
Gma02g01820 585 ProSitePatterns EF-hand calcium-binding domain. 436 448 IPR018247 -
Gma02g01820 585 SMART efh_1 427 455 IPR002048 GO:0005509
Gma02g01820 585 SMART efh_1 533 561 IPR002048 GO:0005509
Gma02g01820 585 SMART efh_1 499 527 IPR002048 GO:0005509
Gma02g01820 585 SMART efh_1 463 491 IPR002048 GO:0005509
Gma02g01820 585 CDD EFh 499 559 IPR002048 GO:0005509
Gma02g01820 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Gma02g01820 585 MobiDBLite consensus disorder prediction 58 93 - -
Gma02g01820 585 ProSitePatterns EF-hand calcium-binding domain. 472 484 IPR018247 -
Gma02g01820 585 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 570 - -
Gma02g01820 585 PANTHER CALCIUM-DEPENDENT KINASE 25 570 - -
Gma02g01820 585 Gene3D Transferase(Phosphotransferase) domain 1 208 386 - -
Gma02g01820 585 ProSitePatterns EF-hand calcium-binding domain. 508 520 IPR018247 -
Gma02g01820 585 SMART serkin_6 122 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01820 585 ProSiteProfiles EF-hand calcium-binding domain profile. 495 530 IPR002048 GO:0005509
Gma02g01820 585 ProSitePatterns Protein kinases ATP-binding region signature. 128 155 IPR017441 GO:0005524
Gma02g01820 585 SUPERFAMILY Protein kinase-like (PK-like) 122 381 IPR011009 -
Gma02g01820 585 Gene3D Phosphorylase Kinase; domain 1 125 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01820 Gma-Chr2 42178956 42183830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01820 1 561 EF-hand Containing Proteins AT5G04870 71.044 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma02g01820 Pkinase 7.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01820 K13412 - gmx:100783079 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00783 10 10574318 10578846 Gma02g01820 02 42178956 42183830 GST
Gma02g01820 02 42178956 42183830 Gma03g01876 03 44731110 44735560 PCT