Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01805 atgggctcaaaagtctaccctaaggttcatgagaaccctaaggccttctttatcaactctagcccaatcttcttggagcctcttgctcatggctctgCATTTTGGAACAAGAGGATCTCACAAGAGGTTGTTGGTGATGCTCTGGGTGAGGAATTCAAAGGCTATGTCTTCATAATTACTGGAGGTTGTGACAAGCAAGGATTTCCAATTAAGCAAGGAGTGTTGACCCCTGGTCGTGTTTGCCTCTTGCTGCATAGAGGAACTCCTTGTTTCCGTGGTTATGGAAGGCGTAATGGAGAGCGTAGGAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCTGATCTCTCTGTTCTCAAACTTGGTAATTGTGAAGAAGGGTGA 381 0.3465 MGSKVYPKVHENPKAFFINSSPIFLEPLAHGSAFWNKRISQEVVGDALGEEFKGYVFIITGGCDKQGFPIKQGVLTPGRVCLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLKLGNCEEG 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01805 126 Pfam Ribosomal protein S6e 32 120 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gma02g01805 126 PANTHER 40S RIBOSOMAL PROTEIN S6 19 120 - -
Gma02g01805 126 PANTHER 40S RIBOSOMAL PROTEIN S6 19 120 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gma02g01805 126 SMART Ribosomal_S6e_2 16 119 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01805 Gma-Chr2 41811595 41813282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01805 33 126 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 82.979 3.52e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01805 K02991 - gmx:121174260 165.236