LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma02g01797	ATGGAGGGTGAGAACGCGAGCAAGGTGATTGAATTGGTGAACGAGATAGCCAGCATCTTTGAGTACAGGCCTCTGATGAAGAAGCAGTACTGCAACTTGGTGTGGAGGCTGAAGCTTCTGATCCCGATGTTAGAGGAGATTAGGGACATGAACAAAGATGCGCTTGCCAAGGACACTTCCAATGCCGTCCTCGCCTTCAAGGAAGCTCTCCAATCCGCTAGGAAACTCCTTAGATTCGGAAGCGAAGGCTGCAAGTTTTACATGgcctga	270	0.4852	MEGENASKVIELVNEIASIFEYRPLMKKQYCNLVWRLKLLIPMLEEIRDMNKDALAKDTSNAVLAFKEALQSARKLLRFGSEGCKFYMA	89

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma02g01797	89	Gene3D	-	4	89	IPR036537	GO:0007166
	Gma02g01797	89	PANTHER	RING-TYPE E3 UBIQUITIN TRANSFERASE	4	88	-	-
	Gma02g01797	89	PANTHER	U BOX DOMAIN-CONTAINING	4	88	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma02g01797	Gma-Chr2	41435458	41436989	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma02g01797	1	88	U-box Gene Family	AT3G46510	47.253	4.29e-18	75.5

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma02g01797	-		-	gmx:100812160	147.902

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