Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01797 ATGGAGGGTGAGAACGCGAGCAAGGTGATTGAATTGGTGAACGAGATAGCCAGCATCTTTGAGTACAGGCCTCTGATGAAGAAGCAGTACTGCAACTTGGTGTGGAGGCTGAAGCTTCTGATCCCGATGTTAGAGGAGATTAGGGACATGAACAAAGATGCGCTTGCCAAGGACACTTCCAATGCCGTCCTCGCCTTCAAGGAAGCTCTCCAATCCGCTAGGAAACTCCTTAGATTCGGAAGCGAAGGCTGCAAGTTTTACATGgcctga 270 0.4852 MEGENASKVIELVNEIASIFEYRPLMKKQYCNLVWRLKLLIPMLEEIRDMNKDALAKDTSNAVLAFKEALQSARKLLRFGSEGCKFYMA 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01797 89 Gene3D - 4 89 IPR036537 GO:0007166
Gma02g01797 89 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 4 88 - -
Gma02g01797 89 PANTHER U BOX DOMAIN-CONTAINING 4 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01797 Gma-Chr2 41435458 41436989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01797 1 88 U-box Gene Family AT3G46510 47.253 4.29e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01797 - - gmx:100812160 147.902