Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01789 ATGGAATGGCTTGCATTCAAGTGGTCACCACAAGTTAAGGCCAACCTCATTTATGACTTCAAGTTTGTTTCCAACAAGGATGAACTTTACTACACATACAACCTTAAGAACTCATCTATGATCTCAAGGTTGGTGCTAAATGCAACAAGCTACGTTCGTAAGCAATATGTATGGAACAAATCAAAGCAAAGATGGGAGGTGTACACTTTAGTACCACTGGACTTATGTGACAGCTATTCCCTTTGTGGAGCTAATGCAAATTGTGTAATTTCATATTCACCAGTGTGCCAATGTTTGCAAGGGTTCAAGTCTAAGTTACCTGAAGAAGGGAGCTCAATGGATTGGTCTCACGGATGCATCCGCAATAAGGAATTAAGGTGTGAGAACAAGAACAATGATGGATTTAACAAATTGACTTTGCTGAAAAAGTCTGACACTACACATAGTTGGCTGGATCAGATAGTTGGGTTAGAGGAATGCAAAGCCAAGTGCTTGGATAACTGTTCTTGTATGGCTTATACGAATTCGGATATCAGTGGACAAGGAAGTGGTTGTGCTATGTGGTTTGGTGATCTAATTGATATTAGACAGTTTGCAGCTGTAGGCCAGATCAGACTTCAATATCAAATCAAATCAAATCAAAACAGTGGAATGCAAGTGGATGATATGGACCTACCAGTTTTTGACCTATCAACAATAGCTAAGGCCACTAGCAACTTCACAATCAAGAACAAAATTGGAGAAGGTGGTTTTGGATCTGTATACAGGGATTCTAGACTAAGGATTATCCACAAAGATCTCAAAGCAAGTAATGTTTTACTTGACAGTGAGTTGAACCCCAAAATTTCAGAGTTTGGCACGGCTAGAATTTTCGGTGTAGATCAGCAAGAAGGAAACACAAAGAGAATAGTTGGGACATACGGTTACATGGCACCAGAATATGCAACTGATGGGCTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTTTACTGCTGGAGATTATATTAGGAAAAAGAAGTAGAGAATATTACAATCAGAACCACAACGAATCTCATAGGCCAT 1069 0.392 MEWLAFKWSPQVKANLIYDFKFVSNKDELYYTYNLKNSSMISRLVLNATSYVRKQYVWNKSKQRWEVYTLVPLDLCDSYSLCGANANCVISYSPVCQCLQGFKSKLPEEGSSMDWSHGCIRNKELRCENKNNDGFNKLTLLKKSDTTHSWLDQIVGLEECKAKCLDNCSCMAYTNSDISGQGSGCAMWFGDLIDIRQFAAVGQIRLQYQIKSNQNSGMQVDDMDLPVFDLSTIAKATSNFTIKNKIGEGGFGSVYRDSRLRIIHKDLKASNVLLDSELNPKISEFGTARIFGVDQQEGNTKRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLLLEIILGKRSREYYNQNHNESHRP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01789 356 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 256 351 - -
Gma02g01789 356 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 2 258 - -
Gma02g01789 356 ProSiteProfiles PAN/Apple domain profile. 127 213 IPR003609 -
Gma02g01789 356 Gene3D Transferase(Phosphotransferase) domain 1 256 356 - -
Gma02g01789 356 CDD PAN_AP_plant 125 206 - -
Gma02g01789 356 Pfam Protein kinase domain 261 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01789 356 SUPERFAMILY Protein kinase-like (PK-like) 228 344 IPR011009 -
Gma02g01789 356 SMART serkin_6 173 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01789 356 SMART ntp_6 130 210 IPR003609 -
Gma02g01789 356 Pfam S-locus glycoprotein domain 5 105 IPR000858 GO:0048544
Gma02g01789 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Gma02g01789 356 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 258 - -
Gma02g01789 356 Pfam PAN-like domain 127 195 IPR003609 -
Gma02g01789 356 ProSiteProfiles EGF-like domain profile. 72 108 IPR000742 -
Gma02g01789 356 ProSiteProfiles Protein kinase domain profile. 92 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01789 356 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 256 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01789 Gma-Chr2 41361597 41364285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01789 245 349 Receptor kinase-like Gene Family AT4G05200 64.815 2.49e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma02g01789 S_locus_glycop 1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01789 - - gmx:100778155 424.861