Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01775 ATGGAGAAAGCAAATACATCACTAGTGAGAACAAAATCAGACCAACTAGTGGAGTCGATGGTGGCGGCCCTGAAGTCGCCAGCATCGAGCGACCACTCCGCGAACGGGGTGGTTGAAGGCGGGGGGACCATCTCCAGGAAGTCGAGCCGGCGGCTGACGGGGGCGTCACCGGGGCGCGGCGGGAAGAACACGCACATAAGGAAGTCTAGGAGTGCTCAGATAAGTCAAATGAAGCTGGAGCTCGATGATGTGAGTAGTGGTGCCGCACTTAGCAGAGCCTCAAGTGCTAGCTTGGGACTCTCTTTCTCCTTCACTGGCTTCACTATGCCTCCTGAGGAAATTGCAGACTCCAAGCCCTTCAGTGATGATGATATCCCTGAGGATATTGAATCTGGACCTAGGACGAAGTTTCAAACAGAACCTACTCTACCAATATATCTAAAGTTCACGGATGTGACCTACAAGATAGTGATCAAGGGCATGACAACAACTGAGGAGAAGGATATCTTGAATGGGATCACTGGTTCTGTAAATCCAGGGGAAGTTCTGGCATTGATGGGTCCCTCAGGAAGTGGAAAGACAACTCTTTTAAACCTTCTTGGAGGCAGGTTAAGCCATCCTATAAGTGGTGGTTCTATCACATACAATGACCAACCATATTCTAAGTTTCTTAAGAGCAGGATAGGATTCGTGACACAAGATGATGTTCTGTTTCCTCACCTAACTGTGAAAGAGACATTGACATACGCAGCCAGACTAAGATTACCAAAGACATACACAAAGGAGCAAAAGGAGAAACGAGCTTTAGATGTAATCTATGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATTGGTGGTTCCTTTGTTCGCGGAGTATCTGGTGGTGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTTTTTCTTGATGAACCAACATCTGGTTTGGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTACAAGACATAGCAGAGGCTGGCAAAACAGTGGTGACAACAATTCACCAACCATCAAGCAGACTCTTTCACAAATTTGACAAATTGATCCTTCTTGGAAAAGGGAGTTTGCTTTACTTTGGAAAAGCATCAGAAGCAATGACTTACTTCCAGTCTATAGGATGTTCACCCCTTATTTCCATGAACCCAGCTGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAATGATGTTTCCCTACCTTCAGAGTTGGAAGATAAAGTGCAGATGGGAAATGCAGAAGCTGAAACACTAAATGGGAAGCCATCACCAGCAGTTGTACATGAGTACCTGGTGGAGGCATACGAAACTCGAGTAGCAGAAACAGAAAAGAAAAGACTAATGGTTCCTATACCCATTGATGAAGCACTGAAGACTAAGGTGTGTTCTCATAAGAGACAATGGGGAGCAAGTTGGGATGAGCAATATTCCATACTATTTTGGAGAGGAATCAAAGAACGGAGGCATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTTTATCCACTGCTGTCATCTTAGGATTACTCTGGTGGCAATCAGATACTAAGAACCCAAAAGATCTGCAAGATCAGGCAAGATTGCTATTCTTTATTGCGGTTTTCTGGGGATTTTTTCCTGTTTTCACTGCAATATTCACATTCCCTCAAGAGAGAGCCATGCTGAGTAAGGAGAGAGCAGCAGATATGTACAGATTGAGTGCATACTTCCTGGCTAGAACCACAAGTGACCTTCCACTAGACCTCATTTTACCAGTGCTTTTTCTGCTTGTTGTTTATTTCATGGCCGGTCTCAGACTCAGTGTTGCACCATTTTTCCTCACCATTCTTACTGTTTTCCTCTGCATTGTGGCTGCTCAGGGACTTGGACTTGCTATTGGAGCCACACTTATGGACTTGAAAAGAGCAACAACTTTGGCTTCAGTAACTGTGATGACCTTCATGCTGGCTGGAGGATTTTTTGTGCAGAGAGTCCCCATATTTTTTTCTTGGATCCGGTACATGTCATTCAACTACCACACCTACAAGCTTCTGCTCAAGGTGCAATATGAACACATCTCACCAGTCATCAATGGAATGAGAATTGATAGTGGTGCAACAGAGGTAGCTGCTCTAATAGCCATGGTTTTTGGTTACCGTTTCTTGGCATATCTTTCTCTAAGGCGAATGAAACTTCAATCTGGAGCTTAA 2232 0.4449 MEKANTSLVRTKSDQLVESMVAALKSPASSDHSANGVVEGGGTISRKSSRRLTGASPGRGGKNTHIRKSRSAQISQMKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPFSDDDIPEDIESGPRTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLSHPISGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTYTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMTYFQSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDKVQMGNAEAETLNGKPSPAVVHEYLVEAYETRVAETEKKRLMVPIPIDEALKTKVCSHKRQWGASWDEQYSILFWRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDTKNPKDLQDQARLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSVAPFFLTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQRVPIFFSWIRYMSFNYHTYKLLLKVQYEHISPVINGMRIDSGATEVAALIAMVFGYRFLAYLSLRRMKLQSGA 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01775 743 Pfam ABC transporter 170 321 IPR003439 GO:0005524
Gma02g01775 743 Pfam ABC-2 type transporter 488 697 IPR013525 GO:0016020|GO:0140359
Gma02g01775 743 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 10 737 - -
Gma02g01775 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 385 IPR027417 -
Gma02g01775 743 SMART AAA_5 179 370 IPR003593 -
Gma02g01775 743 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 147 393 IPR003439 GO:0005524
Gma02g01775 743 ProSitePatterns ABC transporters family signature. 293 307 IPR017871 GO:0005524
Gma02g01775 743 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 10 737 - -
Gma02g01775 743 CDD ABCG_EPDR 144 375 - -
Gma02g01775 743 Gene3D - 146 387 IPR027417 -
Gma02g01775 743 MobiDBLite consensus disorder prediction 23 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01775 Gma-Chr2 40721010 40739194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01775 169 407 Calmodulin-binding Proteins AT2G36910 29.796 3.76e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01775 K05681 - gmx:100798801 1414.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01775 02 40721010 40739194 Gma02g01775 02 40721010 40739194 ECH