Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01765 ATGAGAAATGAGATTAACCTTCGGGTGAAGTTCTTGAAGTGTCACACTAGGGTTTTCAAGAAAGCGAGTGAGCTTGCAATCCTCTGTGGTGTGGACCTCATTGTGATTATGTTCTCACCTAGTAATCGTGTTTTCTCTTTTGGCAGCTCCAATGTGGATTATGTTATCCAATGCTATACAATGCAGGGCCCACCTCCCCTCCTCACCTAG 210 0.4476 MRNEINLRVKFLKCHTRVFKKASELAILCGVDLIVIMFSPSNRVFSFGSSNVDYVIQCYTMQGPPPLLT 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01765 69 PANTHER MADS BOX PROTEIN 1 62 - -
Gma02g01765 69 ProSiteProfiles MADS-box domain profile. 1 51 IPR002100 GO:0003677|GO:0046983
Gma02g01765 69 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 2 47 IPR002100 GO:0003677|GO:0046983
Gma02g01765 69 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL23-RELATED 1 62 - -
Gma02g01765 69 SUPERFAMILY SRF-like 2 62 IPR036879 GO:0003677|GO:0046983
Gma02g01765 69 Gene3D - 3 64 IPR036879 GO:0003677|GO:0046983
Gma02g01765 69 PRINTS MADS domain signature 13 28 IPR002100 GO:0003677|GO:0046983
Gma02g01765 69 PRINTS MADS domain signature 28 49 IPR002100 GO:0003677|GO:0046983
Gma02g01765 69 SMART madsneu2 1 50 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01765 Gma-Chr2 40413144 40413353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01765 1 66 Type I MADS-box Gene Family AT5G60440 50.000 3.33e-17 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Gma02g01765 SRF-TF 6.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01765 - - gmx:100808929 105.145