Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01758 ATGTTGCCAAATCTAGACATTGGTGGTGGTGTCAGAGGTGGGGTAGATCTGGCTGGTGGTGGTGTTGTCGGAAGTGGGTGTTTAAGGAGGAGGTTTAGAATGGAGCACGAGAATCATGTTTTTCTTAGAAGATGGGGAGTGTTGAATATTAACTTTTTAAGTCTGCGGTTGTATCGATGGGATAAGGTGAATGGTTCGAGGCAGTGGGTACCACAGTGGGCCCCAGTTTCAAATCCATCTGACATTGCTAGAGTTTGTGGCAATGGAGTTTGTAACTTGGACAAAAGTAAGACAAAAGCCAGTTGCACTTGCTTGCCAGGAACTTCTAAAGTTGGCAGGGATGGCCAGTGCTATGATAATTCATCTCTTGTTGGAAATTGCAATGGCAAGCATGAAAACCTGACATCACAGTTTAGGATTTCAGCGGTGCAGCAAACCAACTACTATTTTTCTAAATTTTTGGTAATAGCTAACTATAGTGATATTTCTAATGTGTCAAAATATGGGGATGCTTGCTTGTCAGATTGTGAATGTGTGGCTTCTGTTTATGGGCTAAATGAGGAGAGTGTTCACAGAAAAAGAACTTTGAAAAGGGAGATGGAAAGTTCCTTCATCTTATCAGGTGCTCCAATGAGTTTCACATACCGCAATTTGCAAATTAGGACATGCAACTTCTCACAACTGCAAGGAACAGGTGGATTTGGGAGTGTATATAAAGGAAGCCTGGGAGATGGTACTCTAGTGGCAGTGAAGAAACTTGACAGGGTTTTGCCTCATGGAGAGAAGGAATTTATCACTGAAGTAAACACTATTGGATCAATGCATCATATGAATTTGGTTCGCCTATGTGGCTATTGTTCAGAGGGATCACATAGCACCCTAGTACCTCGCGGAAAAGTGACAAACGCAAACTATTTCAGCACCCTAGTACCTAGCAGAGGAGTGTATGTAGGGTTTTCTTTGATAGGGGGTTCTGTGGGTTTGAGCGAGCTGTTTCCAGCAGTATTGAAAACAATGTGGGACAATGTGGGTGTCGAGAAAGCAGTTTCCGGCAGATTTCAGGCGGAAGGAGAAAGAGAAGAGCGAGTGCAGGACTCAGAATATTTGAAGTATAAAGACCCTAAGGTGCCACCGAATGTCAGAATCAGTGACTTGTTGAAGAGGATGTCTCTGGAAGAGAAGATAGGTCAAATGACACAAATTGAAAGGAGTGTTGCTACTCCTGATGTGATGAAGAAGTACTTCATTGGGAGTGTGCTCAGTGGGGGAGGGAGTGTTCCGGCGACAAAGGCATCTGCTGAGACCTGGCAGCAAATGGTGAATCAGCTGCAAAAGGCAGCATTGTCTACTTGCCACGGGATTCCGATGATTTATGGAGTTACCAGGCAAGTTTATGGATATGCTAGAATTGAAAGAGTAATCATGAAGTCACATTTGATAACTTTGATTGGAATGATCTGGGATCCTGTGCTCATAAAGAAGATTGGAGAAGCAACTGCCCTTGAAGTTAGAGCTACTGGAATTCCATATGTCTTTGCTCCGTGTATTGCGGTCTGCAGAGATCCAAGATGGGGACGTTGCTATGAAAGCTACAGTGAGGACCCTAAGATTGTTAAAACTATGACGGAAATTATACCTGGCTTGCAAGGAGATATCCCTGGCAATTCCATTAAGGGAGTTCCCTTTGTTGCTGGAAAGAACAAGGTTGCAGCCTGTGTCAAGCACTACTTGGGAGATGGTGGCACAAACAAGGGTATCAATGAGAACAACACTCTGATCAGTTACAATGGATTGCTTAGCATTCACATGCCAGCATACTATGACTCTATCATCAAGGGTGTTTCAACTGTAATGGTCTCGTACTCTAGCTGGAATGGGATGAAAATGCATGCAAACAGAAAACTTATCACTGGTTACCTCAAGAACAAATTGCATTTCAAGGGTCTTGTCATATCAGATTGGCAAGGTATTGACCGGATTACCTCTCCTCCTCATGCTAACTATTCATACTCTGTTCAAGCTAGTGTCAGTGCTGGAATTGATATGTTTATGGTTCCCTACAACTACACCGAGTTCATTGATGAACTAACCCATCAAGTAAAGAACAACATTATCTCAATGAGCAGGATTGATGATGCCGTGGCAAGAATCTTAAGAGTAAAATTTGTCATGGGCTTATTTGAAAATCCATATGCTGATCCAAGCCTGGTGAACCAACTGGGTAGCAAGGAACATAGAGAGATAGCAAGGGAAGCTGTACGTAAATCTCTGGTCTTGCTAAAGAATGGTAAATCTTACAAGAAACCACTTCTTCCTCTTCCCAAAAAGTCCGCAAAAATACTGGTAGCAGGAAGTCATGCTAACAATTTGGGTTATCAATGTGGAGGATGGACAATTACCTGGCAGGGACTTGGTGGCAATGATCTCACTTCAGGTACAACCATCCTTGATGCTGTGAAACAAACCGTTGATCCTACCACTGAAGTTGTCTTCAATGAAAATCCAGATAGGAACTTTGTCAAGTCGTTCAAATTTGACTATGCCCTTGTTGTTGTCGGAGAACACACTTATGCTGAAACATTCGGTGACAGTTTGAATCTGACTATAGCTGATCCAGGTCCAAGTACCATCACCAATGTGTGTGGGGCTATTCGATGCATAGTTGTTCTCGTCACTGGCCGCCCAGTTGTGATTAAGCCATATCTATCAAAAATAGATGCCCTTGTAGCTGCATGGCTTCCCGGCACTGAAGGTCAAGGTGTTGCTGATGTTCTCTACGGTGACTATGAATTCACTGGCAAGCTGGCAAGAACATGGTTCAAGACAGTTGACCAGCTCCCAATGAATATTGGTGATAAACATTATGATCCTCTATATTCATTTGGTTTTGGGTTGACAACAAACATCACTAAATATTGA 2919 0.4293 MLPNLDIGGGVRGGVDLAGGGVVGSGCLRRRFRMEHENHVFLRRWGVLNINFLSLRLYRWDKVNGSRQWVPQWAPVSNPSDIARVCGNGVCNLDKSKTKASCTCLPGTSKVGRDGQCYDNSSLVGNCNGKHENLTSQFRISAVQQTNYYFSKFLVIANYSDISNVSKYGDACLSDCECVASVYGLNEESVHRKRTLKREMESSFILSGAPMSFTYRNLQIRTCNFSQLQGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSHSTLVPRGKVTNANYFSTLVPSRGVYVGFSLIGGSVGLSELFPAVLKTMWDNVGVEKAVSGRFQAEGEREERVQDSEYLKYKDPKVPPNVRISDLLKRMSLEEKIGQMTQIERSVATPDVMKKYFIGSVLSGGGSVPATKASAETWQQMVNQLQKAALSTCHGIPMIYGVTRQVYGYARIERVIMKSHLITLIGMIWDPVLIKKIGEATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKIVKTMTEIIPGLQGDIPGNSIKGVPFVAGKNKVAACVKHYLGDGGTNKGINENNTLISYNGLLSIHMPAYYDSIIKGVSTVMVSYSSWNGMKMHANRKLITGYLKNKLHFKGLVISDWQGIDRITSPPHANYSYSVQASVSAGIDMFMVPYNYTEFIDELTHQVKNNIISMSRIDDAVARILRVKFVMGLFENPYADPSLVNQLGSKEHREIAREAVRKSLVLLKNGKSYKKPLLPLPKKSAKILVAGSHANNLGYQCGGWTITWQGLGGNDLTSGTTILDAVKQTVDPTTEVVFNENPDRNFVKSFKFDYALVVVGEHTYAETFGDSLNLTIADPGPSTITNVCGAIRCIVVLVTGRPVVIKPYLSKIDALVAAWLPGTEGQGVADVLYGDYEFTGKLARTWFKTVDQLPMNIGDKHYDPLYSFGFGLTTNITKY 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01758 972 Pfam Protein tyrosine and serine/threonine kinase 228 295 IPR001245 GO:0004672|GO:0006468
Gma02g01758 972 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 757 966 IPR036881 GO:0004553|GO:0005975
Gma02g01758 972 Pfam Glycosyl hydrolase family 3 N terminal domain 391 720 IPR001764 GO:0004553|GO:0005975
Gma02g01758 972 Gene3D - 742 969 IPR036881 GO:0004553|GO:0005975
Gma02g01758 972 Pfam Glycosyl hydrolase family 3 C-terminal domain 757 966 IPR002772 GO:0004553|GO:0005975
Gma02g01758 972 PRINTS Glycosyl hydrolase family 3 signature 569 585 IPR001764 GO:0004553|GO:0005975
Gma02g01758 972 PRINTS Glycosyl hydrolase family 3 signature 523 539 IPR001764 GO:0004553|GO:0005975
Gma02g01758 972 PRINTS Glycosyl hydrolase family 3 signature 639 657 IPR001764 GO:0004553|GO:0005975
Gma02g01758 972 PANTHER - 365 970 - -
Gma02g01758 972 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 365 970 - -
Gma02g01758 972 SUPERFAMILY (Trans)glycosidases 369 756 IPR017853 -
Gma02g01758 972 Gene3D - 364 741 IPR036962 GO:0004553|GO:0005975
Gma02g01758 972 SUPERFAMILY Protein kinase-like (PK-like) 201 294 IPR011009 -
Gma02g01758 972 SMART tyrkin_6 223 482 IPR020635 GO:0004713|GO:0006468
Gma02g01758 972 Gene3D Phosphorylase Kinase; domain 1 185 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01758 Gma-Chr2 39932708 39946129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01758 369 967 Glycoside Hydrolase AT5G20950 73.456 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma02g01758 Glyco_hydro_3 5.2e-61 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01758 K05349 - gmx:100797197 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01758 02 39932708 39946129 Gma02g01758 02 39932708 39946129 ECH
Gma10g01010 10 26678983 26683459 Gma02g01758 02 39932708 39946129 GST