Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01753 ATGAAGACAAAGATGCCATTGAAGCAGCTGAAGCTCGCGGTTCCTGCTCAGGAAACCCCCATCACATCTTTCCTGACTGCAAGCGGAACATTCCATGATGGAGATCTACTCTTGAATCAGAAAGGGTTGCGTCTTATCTCTGAAGAAAAAGAATCACGGCCTTCAGATGGTAAGGAACTGGAATTTGACTTCTCGCTGGATGACCTTGAGACCATCAAAGTAATTGGAAAAGGCAGTGGTGGTGTGGTACAACTTGTTCGCCATAAGTGGGTTGGAAGATTGTTTGCTTTAAAGGTTGTTATTCAGATGAATATACAAGAGGATATTCGAAAACAGATTGTTCAGGAACTGAAAATAAATCAAGCGTCACAGTGTCCACATGTTGTAGTTTGCTATCACTCATTCTATCATAACGGAGTAATATCTCTTGTGCTAGAATACATGGATCGTGGTTCTCTAGCAGATGTAATCAAACAAGTTAAAACTATTCTGGAACCATATCTTGCTGTGGTTTCTAAGCAGGTATTGCAAGGCCTCGTTTACCTGCACAATGAAAGGCATGTAATACATAGGGACATTAAACCATCCAATCTGTTAGTTAATCACAAAGGGGAGGTGAAGATTACTGATTTTGGTGTTAGCGCCATGCTAGCAAGCTCAATGGGCCAAAGGGATACATTTGTTGGAACTTACAATTACATGTCGCCAGAAAGAATCAGTGGGAGTACTTATGATTATAGCAGTGACATCTGGAGTTTGGGTATGGTAGTGCTTGAGTGTGCCATAGGACGGTTTCCTTATATACAGTCCGAAGATCAGCAAAGCTGGCCTAGTTTTTATGAGCTTCTGGCAGCAATTGTGGAAAGCCCCCCACCTTCTGCTCCACCCGATCAGTTCTCCCCGGAGTTCTGTTCATTTGTGTCATCCTGCATACAAAAGGATCCTCGGGATAGATTAACATCATTGAAGCTTCTGGATCATCCTTTCATAAAAAAGTTTGAAGATAAAGATCTAGATCTTGGGATTTTGGCAGGGGAATTTCTCGTCAGTTATGCCATATTAGATATGATTTTACCGGTATCCGTCCTAAGTTTGGTGGCTTTATTACAGTTTTATGAACACTGA 1125 0.4169 MKTKMPLKQLKLAVPAQETPITSFLTASGTFHDGDLLLNQKGLRLISEEKESRPSDGKELEFDFSLDDLETIKVIGKGSGGVVQLVRHKWVGRLFALKVVIQMNIQEDIRKQIVQELKINQASQCPHVVVCYHSFYHNGVISLVLEYMDRGSLADVIKQVKTILEPYLAVVSKQVLQGLVYLHNERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGSTYDYSSDIWSLGMVVLECAIGRFPYIQSEDQQSWPSFYELLAAIVESPPPSAPPDQFSPEFCSFVSSCIQKDPRDRLTSLKLLDHPFIKKFEDKDLDLGILAGEFLVSYAILDMILPVSVLSLVALLQFYEH 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01753 374 ProSiteProfiles Protein kinase domain profile. 69 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01753 374 SUPERFAMILY Protein kinase-like (PK-like) 66 343 IPR011009 -
Gma02g01753 374 SMART serkin_6 69 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01753 374 CDD PKc_MAPKK_plant_like 67 334 - -
Gma02g01753 374 Gene3D Transferase(Phosphotransferase) domain 1 151 344 - -
Gma02g01753 374 Gene3D Phosphorylase Kinase; domain 1 38 149 - -
Gma02g01753 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 1 346 - -
Gma02g01753 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Gma02g01753 374 Pfam Protein kinase domain 70 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01753 374 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Gma02g01753 374 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01753 Gma-Chr2 39336690 39347873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01753 1 345 MAP Kinase Kinase Gene Family AT5G56580 85.549 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Gma02g01753 Pkinase 2.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01753 K04368 - gmx:100792457 668.307