Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01751 ATGGTGAGTTTTCTGAACCCGGAGGAGTTCGAACTGAGTGACAAGGATCGTTCCATCGAAGCGTTGGAGAAATGGAGATCCGCAGCGTGGTTGGTCAAGAACCCTAGAAGGCGCTTCCGCTGGGCCGCGGATCTCGTCAAGCGCAAACACGCCGAAGATAAACGCCGCAAAATTCAGGTTCCGTTTCTTTCTCTCTTTCTCGTTTCTCTTCCTCAAGCTGAATACAAGGTGTCAGAAAAGACGAGAGAAGCTGGTTTTGGTATTGAACCAGATGATATTGCATCAGTTGTTCGAGGCCATGATTACACGAACTATAAAAAAATTGGTCAAGTTGAAGGGATTATAGAGAAACTCCGTGCCTCAGTCGATGACGGTGTTGGTCAAGCCAGTATAGATACCAGGCAAGAGATTTATGGAGTCAACCGTTATACTGAGAAACCTTCTAAAAGCTTCCTCATGTTTGTTTGGGAAGCACTGCATGACTTAACACTAATCATTCTCATGGTTTGTGCTATAGTTTCTATAGCTATAGGGCTTCCCACTGAAGGGTGGCCAAAAGGTGTTTATGATGGTCTGGGAATCATACTTAGTATATTCTTGGTGGTCATTGTTACTGCTATCAGTGACTACCAGCAATCCCTGCAGTTCAGGGATTTGGACAAAGAAAAGAAAAAGATCTTTGTTCAGGTCACGAGGGACAGAAAAATACAGAAGATCTCAATTTATGATTTGGTTGTGGGAGATATTGTTCATTTGTCAACTGGTGATCAAGTTCCAGCTGATGGAATTTATATATCAGGATACTCTTTGATAATTGATGAGTCAAGTTTGACAGGTGAGAGCGAACCAGTAAATATAGATGGAAAAAAACCTTTTCTTCTTTCAGGAACCAAAGTGCAAGATGGTCAGGGGAAGATGATAGTTACAACTGTTGGCATGAGGACTGAATGGGGAAAGTTGATGGAAACTCTAAGTGAGGGAGGAGAGGATGAGACTCCACTGCAGGTGAAATTGAATGGAGTTGCTACAGTTATTGGTAAAATTGGTTTGACTTTTTCTGTGCTGACATTTGTGGTGTTGACAATAAGGTTTGTTGTTGAAAAAGCAGTTCGTGGTGAGTTTGCTAGTTGGTCTTCAAATGATGCATTGAAGCTGCTGGACTACTTTGCTATTGCGGTAACCATAATAGTTGTTGCAATTCCTGAAGGACTGCCATTAGCTGTGACACTCAGTCTTGCTTTTGCGATGAAAAAGTTAATGAAGGATAAAGCACTAGTGAGACATCTTTCTGCCTGTGAGACTATGGGTTCAGCGACCTGCATCTGCACAGATAAAACAGGAACATTGACCACTAACCATATGGTGGTTAATAAAATTTGGATATGTGGAAAGAGCAATGAGATTAAAGGTAATGAGAGTGTTGACAAACTAAAGACAGAGATATCTGAAGAAGTTTTAAGCATCCTTTTGCGGTCTATATTTCAAAATACTTCTTCCGAAGTTGTTAAGGACAAAGATGGAAAAATGACAATATTGGGAACACCAACAGAATCAGCATTGTTAGAATTTGGTTTGCTTTCAGGTGGTGATTTTGAAGCACAGCGTGGAACATATAAGATACTTAAGGTTGAGCCTTTCAATTCAGTGCGGAAGAAGATGTCTGTGCTAGTCGGTCTTCCTGATGGAAGTGTCCAAGCTTTCTGCAAAGGTGCATCAGAAATAGTATTAAAATTGTGTAACAAAGTTATTGATCCAAATGGAACAGCTGTTGATCTTTCTGATGAGGAGGCAAAGAAAGTCTCTGATATTATAAATGGATTTGCCTCTGAAGCTTTGAGAACTCTTTGTTTAGCTGTCAAAGATGTAAATGAAACCCAAGGAGAAGCCAGTATCCCTGAAGATAGCTATTCTCTGATAGCCATTGTGGGAATCAAGGATCCTGTGCGCCCTGGGGTTAGGGAAGCTGTTAAAACTTGTTTAGCTGCTGGAATAACTGTCCGCATGGTAACCGGTGATAACATAAATACAGCTAAGGCTATAGCTAGAGAATGTGGCATTCTTACAGAGGATGGTGTGGCCATCGAAGGACCCCAGTTTCAGGACTTGTCTATAGAGCAAATGAAGAGTATTATACCAAGAATTCAGGTTGTTATGGCGCGATCCTTACCTCTTGACAAGCATACCTTGGTAACCCATTTGAGGAAGATGTTTGGTGAGGTTGTAGCTGTTACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGTCAGACATTGGGCTTGCTATGGGCATATCTGGAACTGAGGTTGCCAAAGAAAATGCTGATGTCATTATAATGGATGATAACTTCACTACTATTGTCAATGTGGCCAGGTGGGGACGGGCCATATACATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTCAATATTGTTGCTCTGATTATTAACTTTGTTTCTGCATGCATCACAGGATCTGCTCCCCTCACAGCTGTTCAGTTGCTTTGGGTCAACCTGATTATGGACACTCTGGGTGCTTTGGCCTTGGCCACTGAACCTCCCAATGATGGACTTATGCTAAGACCCCCAGTTGGAAGGACAACAAATTTTATCACCAAACCCATGTGGAGGAATATTTTTGGTCAAAGTTTATATCAACTAATTGTCCTTGCGGTCCTCACTTTTGATGGGAAGAGGCTACTGAGAATTAATCGTCCAGATGCAACTATAGTGCTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGGTTTTCAATGAGATAAACAGCCGAGAAATCGAAAAGATAAACATATTCAAAGGCATGTTTGAGAGCTGGATATTTTTTACGGTGATCTTCTCCACAGTGGTGTTCCAAGTACTCATAGTTGAGTTCCTGGGAACATTTGCCAGTACAGTGCCTCTAAGCTGGCAATTCTGGGTGCTCAGTGTCGTAATCGGAGCATTTAGCATGCCTATATCTGCTATACTCAAGTGCATCCCAGTTGAAAGAGGAGATGCTACAACGCACCATGATGGTTACGAGGCGCTACCTTCTGGTCCCGAGCTGGCATAA 3084 0.4193 MVSFLNPEEFELSDKDRSIEALEKWRSAAWLVKNPRRRFRWAADLVKRKHAEDKRRKIQVPFLSLFLVSLPQAEYKVSEKTREAGFGIEPDDIASVVRGHDYTNYKKIGQVEGIIEKLRASVDDGVGQASIDTRQEIYGVNRYTEKPSKSFLMFVWEALHDLTLIILMVCAIVSIAIGLPTEGWPKGVYDGLGIILSIFLVVIVTAISDYQQSLQFRDLDKEKKKIFVQVTRDRKIQKISIYDLVVGDIVHLSTGDQVPADGIYISGYSLIIDESSLTGESEPVNIDGKKPFLLSGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATVIGKIGLTFSVLTFVVLTIRFVVEKAVRGEFASWSSNDALKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVNKIWICGKSNEIKGNESVDKLKTEISEEVLSILLRSIFQNTSSEVVKDKDGKMTILGTPTESALLEFGLLSGGDFEAQRGTYKILKVEPFNSVRKKMSVLVGLPDGSVQAFCKGASEIVLKLCNKVIDPNGTAVDLSDEEAKKVSDIINGFASEALRTLCLAVKDVNETQGEASIPEDSYSLIAIVGIKDPVRPGVREAVKTCLAAGITVRMVTGDNINTAKAIARECGILTEDGVAIEGPQFQDLSIEQMKSIIPRIQVVMARSLPLDKHTLVTHLRKMFGEVVAVTGDGTNDAPALHESDIGLAMGISGTEVAKENADVIIMDDNFTTIVNVARWGRAIYINIQKFVQFQLTVNIVALIINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMLRPPVGRTTNFITKPMWRNIFGQSLYQLIVLAVLTFDGKRLLRINRPDATIVLNTLIFNSFVFCQVFNEINSREIEKINIFKGMFESWIFFTVIFSTVVFQVLIVEFLGTFASTVPLSWQFWVLSVVIGAFSMPISAILKCIPVERGDATTHHDGYEALPSGPELA 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01751 1027 SMART Cation_ATPase_N_a_2 107 179 IPR004014 -
Gma02g01751 1027 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 194 506 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma02g01751 1027 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 717 832 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma02g01751 1027 PRINTS P-type cation-transporting ATPase superfamily signature 768 780 - -
Gma02g01751 1027 PRINTS P-type cation-transporting ATPase superfamily signature 273 287 - -
Gma02g01751 1027 PRINTS P-type cation-transporting ATPase superfamily signature 442 456 - -
Gma02g01751 1027 PRINTS P-type cation-transporting ATPase superfamily signature 640 651 - -
Gma02g01751 1027 PRINTS P-type cation-transporting ATPase superfamily signature 662 672 - -
Gma02g01751 1027 PRINTS P-type cation-transporting ATPase superfamily signature 744 763 - -
Gma02g01751 1027 Pfam Cation transporter/ATPase, N-terminus 110 174 IPR004014 -
Gma02g01751 1027 Pfam Cation transport ATPase (P-type) 498 582 - -
Gma02g01751 1027 PANTHER CALCIUM-TRANSPORTING ATPASE 10 1012 - -
Gma02g01751 1027 CDD P-type_ATPase_Ca_PMCA-like 131 877 - -
Gma02g01751 1027 ProSitePatterns E1-E2 ATPases phosphorylation site. 444 450 IPR018303 -
Gma02g01751 1027 Gene3D - 125 325 - -
Gma02g01751 1027 Pfam Ca2+-ATPase N terminal autoinhibitory domain 8 49 IPR024750 GO:0005516
Gma02g01751 1027 Gene3D - 452 647 IPR023299 GO:0000166
Gma02g01751 1027 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 103 1006 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Gma02g01751 1027 PRINTS H+-transporting ATPase (proton pump) signature 600 618 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma02g01751 1027 PRINTS H+-transporting ATPase (proton pump) signature 776 801 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma02g01751 1027 PRINTS H+-transporting ATPase (proton pump) signature 744 760 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma02g01751 1027 Gene3D - 157 1003 - -
Gma02g01751 1027 Gene3D - 439 789 IPR023214 -
Gma02g01751 1027 SFLD p-type atpase 424 797 IPR044492 -
Gma02g01751 1027 SUPERFAMILY Calcium ATPase, transmembrane domain M 109 1005 IPR023298 -
Gma02g01751 1027 Pfam Cation transporting ATPase, C-terminus 829 1002 IPR006068 -
Gma02g01751 1027 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 448 652 IPR023299 GO:0000166
Gma02g01751 1027 Pfam E1-E2 ATPase 227 421 - -
Gma02g01751 1027 SUPERFAMILY HAD-like 441 849 IPR036412 -
Gma02g01751 1027 SUPERFAMILY Calcium ATPase, transduction domain A 227 323 IPR008250 -
Gma02g01751 1027 Gene3D - 17 65 - -
Gma02g01751 1027 PANTHER CATION TRANSPORTING ATPASE 10 1012 - -
Gma02g01751 1027 SFLD Haloacid Dehalogenase 424 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01751 Gma-Chr2 39071432 39083184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01751 66 1024 Primary Pumps ATPases AT3G57330 71.741 0.0 1424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01751 K01537 - gmx:100791934 1956.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01751 02 39071432 39083184 Gma02g01751 02 39071432 39083184 ECH
Gma10g01019 10 26991708 26996238 Gma02g01751 02 39071432 39083184 GST
Gma19g01294 19 42133406 42144133 Gma02g01751 02 39071432 39083184 PCT
Gma03g01245 03 38365039 38377734 Gma02g01751 02 39071432 39083184 PCT
Gma02g01751 02 39071432 39083184 Gma19g01294 19 42133406 42144133 PCT
Gma02g01751 02 39071432 39083184 Gma03g01245 03 38365039 38377734 PCT