Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01725 ATGTCTCTCATGGCGCCTCGAGGAGCGACAATGTTGTTCCTTCTATGCACTCTCTGCTATTCTCTAATCGCCATTGTTGGAAAGAGCTATTACGATATACTTCAACATTCTAAGGGTGCGTCGGACGAGCAGATAAAGAGAGCATATAGGAAGCTAGCAATGAAGTACCATCCTGATAAGAACCCAGGCAATGAAGTGCCTACTAAGATCTTGCAGCCTCGTTTAGCCACTCCTACTTTGGCCAAATTCTTGTTCAACTCCCCTAGCCTTTCTCTTGCACTTCAAAGTGATATAGATGGAAAAAGGGATGTGAACATATTAATGCCCAAGAATTTCGAGCAGAATGGATTGAGAAGGAACCGGGAAGAGGTGCATGAAAGCAAATCTGGCAGGGACAACATGGATGGTGGTTCTGGTGATGATTTTGATGTTGTCGACAACCCACCAAGGAAAAAATGCTATCACCGACACACTCATCAGCAAATTCAAGAGCTTGAATCGCTTTTCAAGGAGTGTCCTTACCCGGATGAGAAACAAAGGCTTGAACTCAGCAGAAGACTTAATTTGGAAATGAGACGAGTAAAGTTTTGGTTCCAAAATCGAACTCAAATGAAGGTTCCAGAAATGGAAGGCAAGAATGAAAGTCATATGACATCAGCAACAACCTTTGTGGAAGGGGGGTTCAAGAAGCTTGTGATAATGCTTGCAGCATATGCCTTGAGGATTTTTGCAAAAGTGATTCTGCCACTGTCACTAATTGCTAGCATGAGTTCCACCTGCAGTGCATTCTTGAATGTATACTTAACTCAGCCTAGTGCACCACCATCAACAGTAGGAGGGGGAAGTGAACCAACTGCAATTGCTGTAGGAAGTCCATCTACCCCACTTACAATTGATGGAAATGAGCAATCATCACTACAGCAGATCCCCTATGTTCAAACTTGGAGTTCTTTAACTTCTGCCTCTACTGTCGCAACAACAAATCTTCAAGGAGTTCACTCTAATGATAGGTAG 1014 0.4329 MSLMAPRGATMLFLLCTLCYSLIAIVGKSYYDILQHSKGASDEQIKRAYRKLAMKYHPDKNPGNEVPTKILQPRLATPTLAKFLFNSPSLSLALQSDIDGKRDVNILMPKNFEQNGLRRNREEVHESKSGRDNMDGGSGDDFDVVDNPPRKKCYHRHTHQQIQELESLFKECPYPDEKQRLELSRRLNLEMRRVKFWFQNRTQMKVPEMEGKNESHMTSATTFVEGGFKKLVIMLAAYALRIFAKVILPLSLIASMSSTCSAFLNVYLTQPSAPPSTVGGGSEPTAIAVGSPSTPLTIDGNEQSSLQQIPYVQTWSSLTSASTVATTNLQGVHSNDR 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01725 337 PRINTS DnaJ domain signature 31 49 IPR001623 -
Gma02g01725 337 PRINTS DnaJ domain signature 49 64 IPR001623 -
Gma02g01725 337 SUPERFAMILY Chaperone J-domain 16 67 IPR036869 -
Gma02g01725 337 Pfam Homeodomain 154 201 IPR001356 GO:0003677
Gma02g01725 337 CDD DnaJ 30 65 IPR001623 -
Gma02g01725 337 Gene3D DnaJ domain 26 80 IPR036869 -
Gma02g01725 337 ProSiteProfiles dnaJ domain profile. 29 116 IPR001623 -
Gma02g01725 337 SMART dnaj_3 28 80 IPR001623 -
Gma02g01725 337 SUPERFAMILY Homeodomain-like 135 201 IPR009057 -
Gma02g01725 337 Gene3D - 143 222 - -
Gma02g01725 337 MobiDBLite consensus disorder prediction 274 294 - -
Gma02g01725 337 ProSiteProfiles 'Homeobox' domain profile. 148 208 IPR001356 GO:0003677
Gma02g01725 337 SMART HOX_1 150 212 IPR001356 GO:0003677
Gma02g01725 337 CDD homeodomain 151 201 IPR001356 GO:0003677
Gma02g01725 337 Pfam DnaJ domain 30 65 IPR001623 -
Gma02g01725 337 MobiDBLite consensus disorder prediction 117 143 - -
Gma02g01725 337 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 97 206 - -
Gma02g01725 337 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 97 206 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01725 Gma-Chr2 37457973 37460465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01725 62 206 Homeobox Transcription Factor Family AT4G00730 53.548 8.35e-42 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gma02g01725 Homeodomain 2.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01725 K09338 - gmx:100783614 235.728