Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01724 ATGATTGGCAGGTGTCTTACAGGTAAAAGAAAACTAAAGGATTTATTGCTTCAAAAAGATAATCGCTTTTGTGCTGATTGCAATGCTCCAGATCCTAAATGGGTGTCAACCAATATTGGAGTTTTTGTATGCTTAAAATGTTGTGGTGTGCACAGAAGTATTGGTTTTCAGATATCAAAG 180 0.3556 MIGRCLTGKRKLKDLLLQKDNRFCADCNAPDPKWVSTNIGVFVCLKCCGVHRSIGFQISK 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01724 60 Pfam Putative GTPase activating protein for Arf 10 60 IPR001164 GO:0005096
Gma02g01724 60 Gene3D Arf GTPase activating protein 7 60 IPR038508 -
Gma02g01724 60 PRINTS HIV Rev interacting protein signature 21 40 IPR001164 GO:0005096
Gma02g01724 60 PRINTS HIV Rev interacting protein signature 40 57 IPR001164 GO:0005096
Gma02g01724 60 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 1 60 - -
Gma02g01724 60 SUPERFAMILY ArfGap/RecO-like zinc finger 9 60 IPR037278 -
Gma02g01724 60 ProSiteProfiles ARF GTPase-activating proteins domain profile. 9 60 IPR001164 GO:0005096
Gma02g01724 60 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 1 60 IPR044518 GO:0005096|GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01724 Gma-Chr2 37450801 37451216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01724 2 60 C2H2 Transcription Factor Family AT4G21160 69.492 5.03e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01724 K12486 - gmx:100806567 112.849