Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01720 ATGATTATCTTACCTTCTTCCTCCTGCTATGCGCAATCAATGGTTGCCATTGTGGTTATCAATTTTTTGCTATTCCAACAGCCTTCCTCTGCTAAGCATCACCCGTCCTGTCCTCCTTCCTCATGCGGCAAAATTCGCAACATAACTAATCCTTTTCGACTGAAAGGCGATCCACGCGGTTGCGGCCTCTCAGGGTATGAGTTAGATTGCGTGAATAACGTAACAGTGTTAACTCTGTTTTCAGGGAAATACCACGTGCAGGAAATCAATTACAAGAAATATCAGATCCGACTCACTGATGTTGGTATTGTGGAGGACGCTTGCTCCGTTCCTCGCTATTTCTTATACGAACAAAATTTTAGTTATTTCGAAATTCCTTACTATAGTACACCAGATGCGCTAACTTTTCGTGATATGGAGATAGCAGAGTTTGGGTATCCAAGCATAGGGTTCTTAAACTGTAGTAATGCAGTGACTAATGACCCTCGATATGTGGAAATGGATACCCATCGTTGCGATTCCGAAGGGCATATTTATGCCATTCTGATGTGTGACTTAATTGGCCTTGATCTGATGGACATCAAGGTTGGGTGTCATCTTAAGGTTGCCACCTTTGCAAACTTGTTCAAATCAATCAAAAAGATTGATGATCATTACTATAGTGCAGAATATGTTGATTGCATAAACGCTTCCTCTGCTGATATCCGCAAGTGGCTGAACGGTGGATTTTGGCTGTCTTGGTTGGCACCGGTTATTTGTAGGAAGCAATGTGGAAAGGACGTCAAATGCTTTCTCAACGAAACCACACAAGTTCAATGCGATCGGCATCGTTACTGCCATTACGTCACAACTACCAGTACCAACTGTGGAATTCTACCACGGATTCATGAATATATACTATCATATTTTCACGGCATTATAACTGGATTATTGAGTAGAATAACATTTCGTTCGATGGACATGGATGGCTTTATATCAATATATATAGGAAGAAATGTTTTACCAATATTCATGCTAGCCAGATACCTATTTGGAGTTACACTTTTGCTTGGTCTATCAATTTATAAGTGGCGACGAAGACATTTATCATTGTATGAAAACATCGAAAACTTTCTGCTAGATCACAATATAAATCCCATTAGGTACGAATACAGAGAAATAAAAAAAATGACTGGAGGTTTCAAAGTTAAATTGGGTCAAGGAGGTTTTGGCTCTGTATACAAAGGAAAGCTTCGAAGTGGGCCAGATGTTGCAATAAAGATGTTGAGCAATTCCAAATCTAATGGACAAGATTTTATTAGTGAAGTGGCTACCATTGGAAGAATTCATCATGTGAATGTGGTACGTTTTATTGGATATTGTGTTGAAGGAAAACAAAAACGTGCTCTAGTTTATGAATACATGCCTAATGGGTCATTGGATAAATACATTTTCTCTAAAGAAGGAAGTGTTCCTTTAAGTTATGCGAAAACATATGAAATATCTCTTGGAGTAGCTCATGCAATTGCATACCTGCATCAAGGCTGTGATGTGCAAATTCTACATTTTGATATTAAGCCTCATAATATTCTTCTGGATCAGAACTTCGTTCCAAAGGTTTCAGATTTTGGACTTGCAAAGTTATATCCCGTAAATGATAGCATTGTCACTTTGACTGCTGCAAGAGGAACTTTGGGTTACATGGCTCCTGAATTGTTCTACAAAAATATTGGAGGAGTATCTTATAAGGTTGATGTTTATAGTTTTGGTATGCTTTTGATGGAAATGACAAGTAGAAGAAGGAACTCGAATCCTTGTGCAGAGCATTCAAGCCAACATTACTTCCCATTATGGATCTACGATCAATTTAAAGAAGAGAAAGATGTTGATATGGAAGATGTTTCGGAAGAGGATAAAATTTTAACAAAAAGGATGTTTATAGTTGCACTTTGGTGTATTCAGTTGAAACCGGGAGATCGACCTTCAATGAATGAAGTAGTGGAGATGCTTGAAGGGAAAATTGAAAGTCTTGAAATGCCTCCAAGACCCTCTTTTTACCCACATGAAATGTCAGAACCTAATGCCATAATCAGCTCTGACCAAACAACATGGAGTGATTCCAGTAGCATGGATACCTACCACGGTGAACCTATAAATATTGGATGTGCCTAA 2151 0.3859 MIILPSSSCYAQSMVAIVVINFLLFQQPSSAKHHPSCPPSSCGKIRNITNPFRLKGDPRGCGLSGYELDCVNNVTVLTLFSGKYHVQEINYKKYQIRLTDVGIVEDACSVPRYFLYEQNFSYFEIPYYSTPDALTFRDMEIAEFGYPSIGFLNCSNAVTNDPRYVEMDTHRCDSEGHIYAILMCDLIGLDLMDIKVGCHLKVATFANLFKSIKKIDDHYYSAEYVDCINASSADIRKWLNGGFWLSWLAPVICRKQCGKDVKCFLNETTQVQCDRHRYCHYVTTTSTNCGILPRIHEYILSYFHGIITGLLSRITFRSMDMDGFISIYIGRNVLPIFMLARYLFGVTLLLGLSIYKWRRRHLSLYENIENFLLDHNINPIRYEYREIKKMTGGFKVKLGQGGFGSVYKGKLRSGPDVAIKMLSNSKSNGQDFISEVATIGRIHHVNVVRFIGYCVEGKQKRALVYEYMPNGSLDKYIFSKEGSVPLSYAKTYEISLGVAHAIAYLHQGCDVQILHFDIKPHNILLDQNFVPKVSDFGLAKLYPVNDSIVTLTAARGTLGYMAPELFYKNIGGVSYKVDVYSFGMLLMEMTSRRRNSNPCAEHSSQHYFPLWIYDQFKEEKDVDMEDVSEEDKILTKRMFIVALWCIQLKPGDRPSMNEVVEMLEGKIESLEMPPRPSFYPHEMSEPNAIISSDQTTWSDSSSMDTYHGEPINIGCA 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01720 716 Gene3D Transferase(Phosphotransferase) domain 1 468 672 - -
Gma02g01720 716 SMART serkin_6 392 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01720 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Gma02g01720 716 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 13 688 - -
Gma02g01720 716 Gene3D Phosphorylase Kinase; domain 1 370 467 - -
Gma02g01720 716 PANTHER RUST RESISTANCE KINASE LR10-RELATED 13 688 IPR045874 GO:0004672
Gma02g01720 716 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Gma02g01720 716 SUPERFAMILY Protein kinase-like (PK-like) 377 664 IPR011009 -
Gma02g01720 716 ProSiteProfiles Protein kinase domain profile. 392 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01720 716 ProSitePatterns Protein kinases ATP-binding region signature. 398 420 IPR017441 GO:0005524
Gma02g01720 716 CDD STKc_IRAK 398 665 - -
Gma02g01720 716 Pfam Protein kinase domain 396 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01720 Gma-Chr2 36983512 36999391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01720 374 696 Receptor kinase-like Gene Family AT5G38280 45.783 1.08e-99 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gma02g01720 Pkinase 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01720 - - gmx:100170745 856.67