LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma02g01716	ATGAAAAATCATATTGAGGTGGTGAATGATGAAGCAAATGTTGCTTTGCTAATGGGTTGCAGTTCCCATGAGCTAATGGAAGTATTATCTACCCATAGAATCCAAGCTAGAAAGGATACCATTACCAAGACATTGACCTTGGAGCGGGTAATTGATGCAAGAGATGCATTAGCAAAATTTATCTATGCAAGCTTGTTTGATTGGCTTGTAAAACAAGTTAACAAGTCACTTGAAGTGGGTAAATGCCGCAATGGGAGATCCATATGTATCCTTTATATTTATGGGTTTAAGTCATTCCAGGATTACGAATTAGATGGCATTCATTGGACCAAAGTAGATTTTAAGAGCAATCAAGTGTGTTTGGATCTCTTTGATAAGAAGCCTTTGGGGCTACTCCCTTTGTTGAACAAGGAATCGAATTTCCCCAAGGCCAGTGATCCAACACTTGCAAACAAACTTAAACAGCAACTGCACGATAATCCTTGCTTTAAAGGGGAAAGAGGCAGGGCTTTTAGTGTTTGTCATTATGTAGAGGAGGTAAGTATTAGTACTTAG	555	0.3874	MKNHIEVVNDEANVALLMGCSSHELMEVLSTHRIQARKDTITKTLTLERVIDARDALAKFIYASLFDWLVKQVNKSLEVGKCRNGRSICILYIYGFKSFQDYELDGIHWTKVDFKSNQVCLDLFDKKPLGLLPLLNKESNFPKASDPTLANKLKQQLHDNPCFKGERGRAFSVCHYVEEVSIST	184

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma02g01716	184	Gene3D	Myosin VI head, motor domain, U50 subdomain	2	98	-	-
	Gma02g01716	184	Gene3D	-	99	184	-	-
	Gma02g01716	184	PANTHER	MYOSIN-2 ISOFORM X1	100	181	-	-
	Gma02g01716	184	PANTHER	MYOSIN-2 ISOFORM X1	2	100	-	-
	Gma02g01716	184	PANTHER	MYOSIN	100	181	-	-
	Gma02g01716	184	PANTHER	MYOSIN	2	100	-	-
	Gma02g01716	184	SMART	MYSc_2a	1	184	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Gma02g01716	184	ProSiteProfiles	Myosin motor domain profile.	1	184	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Gma02g01716	184	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	13	181	IPR027417	-
	Gma02g01716	184	Pfam	Myosin head (motor domain)	12	100	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Gma02g01716	184	Pfam	Myosin head (motor domain)	101	181	IPR001609	GO:0003774\|GO:0005524\|GO:0016459

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma02g01716	Gma-Chr2	36620939	36622210	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma02g01716	2	180	Myosins gene family	AT5G54280	56.872	4.29e-72	234

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma02g01716	K10357		-	gmx:100801876	270.011