Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01715 ATGCGGCACCTGCCCAAACACCCGAACGTTGTGTCGTTGAAGGACACGTACGAGGACGACGATGCCGTTCACCTCGTCATGGAGCTCTGCGAGGGCGGCGAGCTCTTCGACCGGATCGTTGCGCGCGGCCACTACACCGAGCGCGCTGCCACCACTGTCACCAGAACCATCGTCGAAGTCGTGAAGGTGTGCCACGAGCATGGTGTGATGCATCGTGATCTCAAACCCGAGAACTTTTTGTTTGGAAACAAGAAGGAAACAGCACCCTTGAAAGTTATTGACTTTGGATTGTCGGTTTTATTCAAACCAGGTGAAAGATTCAATGAGATAGTTGGAAGCCCATATTACATGGCTCCTGAGGTATTAAAGCGTAATTATGGCCCTGAAATAGATATCTGGAGTGCTGGAGTAATTCTCTACATATTACTTTGTGGCGTTCCACCGTTTTGGGCAGAAACTGAACAGGGAGTTGCTCAAGCAATTATTCGATCTATTGTTGATTTTAAAAGGGAGCCATGGCCAAAGGTTTCTGATAATGCAAAAGACCTTGTGAAGAAGATGCTCGATCCTGACCCTAAGCGCCGGCTTACTGCACAAGAAGTGTTAGATCATCCATGGTTACAGAATGAAAAGAAAGCTCCTAATGTTTCATTAGGAGAAACTGTTAGATCAAGGCTCATGCAATTTTCTGTAATGAACAAGCTTAAGAAAAGAGCCTTGAGGGTGATTGCAGAGTATTTGTCCTTAGAAGAAGCTGCTGGAATAAAAGAGGGATTCCAGCTGATGGATACAAGCAATAAAGGCAAGATTAGCGTCGATGAGCTGCGTGTAGGGTTGCATAAACTAGGTCACCAAATTCCTGATGGGGATGTCCAAATACTTATGGATGCTGGTGATGTAGACAACGATGGGTACATAGATTATGGCGAGTTTGTTGCCATTTCCATTCATCTGAGAAAGATAGACAATGATGAGCACCTTCACAAAGCCTTCCAATTTTTTGATGAGAACCAAAGTGGATATATTGAAATTGAGGAGTTACATAATGTCTTAGCTGATGAGATTGAAACAAACAGTGAAGAAGTCATCAATGCAATTATCCATGATGTGGACACAGATAAGGATGGAAGAATAAGTTATGAGGAATTTGCCGCGATGATGAAGGCAGGCACAGATTGGAGGAAAGCATCAAGGCAGTATTCAAGAGAGAGGTTCTCTAGCCTAAGTCAGAAATTGATCAAGGACGGGTCTTTGAAACTAAACAATGATGACGGTAGATGA 1281 0.4403 MRHLPKHPNVVSLKDTYEDDDAVHLVMELCEGGELFDRIVARGHYTERAATTVTRTIVEVVKVCHEHGVMHRDLKPENFLFGNKKETAPLKVIDFGLSVLFKPGERFNEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSIVDFKREPWPKVSDNAKDLVKKMLDPDPKRRLTAQEVLDHPWLQNEKKAPNVSLGETVRSRLMQFSVMNKLKKRALRVIAEYLSLEEAAGIKEGFQLMDTSNKGKISVDELRVGLHKLGHQIPDGDVQILMDAGDVDNDGYIDYGEFVAISIHLRKIDNDEHLHKAFQFFDENQSGYIEIEELHNVLADEIETNSEEVINAIIHDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFSSLSQKLIKDGSLKLNNDDGR 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01715 426 Gene3D Phosphorylase Kinase; domain 1 1 34 - -
Gma02g01715 426 ProSiteProfiles EF-hand calcium-binding domain profile. 358 393 IPR002048 GO:0005509
Gma02g01715 426 Pfam EF-hand domain pair 267 313 IPR002048 GO:0005509
Gma02g01715 426 ProSitePatterns EF-hand calcium-binding domain. 371 383 IPR018247 -
Gma02g01715 426 Gene3D Transferase(Phosphotransferase) domain 1 35 216 - -
Gma02g01715 426 ProSiteProfiles EF-hand calcium-binding domain profile. 322 357 IPR002048 GO:0005509
Gma02g01715 426 SUPERFAMILY EF-hand 231 400 IPR011992 -
Gma02g01715 426 SMART serkin_6 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01715 426 Gene3D - 217 391 - -
Gma02g01715 426 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 404 - -
Gma02g01715 426 ProSiteProfiles EF-hand calcium-binding domain profile. 286 321 IPR002048 GO:0005509
Gma02g01715 426 SUPERFAMILY Protein kinase-like (PK-like) 1 225 IPR011009 -
Gma02g01715 426 CDD STKc_CAMK 1 206 - -
Gma02g01715 426 Pfam EF-hand domain pair 325 388 IPR002048 GO:0005509
Gma02g01715 426 SMART efh_1 326 354 IPR002048 GO:0005509
Gma02g01715 426 SMART efh_1 362 390 IPR002048 GO:0005509
Gma02g01715 426 SMART efh_1 290 318 IPR002048 GO:0005509
Gma02g01715 426 SMART efh_1 254 282 IPR002048 GO:0005509
Gma02g01715 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
Gma02g01715 426 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01715 426 ProSitePatterns EF-hand calcium-binding domain. 299 311 IPR018247 -
Gma02g01715 426 ProSiteProfiles EF-hand calcium-binding domain profile. 250 285 IPR002048 GO:0005509
Gma02g01715 426 Pfam Protein kinase domain 4 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01715 426 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Gma02g01715 426 CDD EFh 326 388 IPR002048 GO:0005509
Gma02g01715 426 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 1 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01715 Gma-Chr2 36611255 36618786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01715 1 424 EF-hand Containing Proteins AT5G19450 77.647 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma02g01715 Pkinase 3.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01715 K13412 - gmx:100815320 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01715 02 36611255 36618786 Gma02g01715 02 36611255 36618786 ECH
Gma19g01328 19 42576447 42580581 Gma02g01715 02 36611255 36618786 PCT
Gma03g01277 03 38847865 38852570 Gma02g01715 02 36611255 36618786 PCT
Gma02g01715 02 36611255 36618786 Gma19g01328 19 42576447 42580581 PCT
Gma02g01715 02 36611255 36618786 Gma03g01277 03 38847865 38852570 PCT