Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01714 ATGGAGAAGATGGCAGCACTCACTACTAATATTATCCACACCCCTCTCTTACCCAACAATACCACTCTTCCAAAGACTTCATCTTTTCAACCCTTCTTCTCTAACCAACTACTTGGCCTCCCCTTATCTTCTTCTTCTTCTTTAACCGTCGCTAAACGGTTCTCTTGCAGGCCCATCAAGTGTTCTGTTTCTGAAGCCACAGAGCCCAAAACAGAGAAGAAGAGGCAATTGCTGAGAAGAGGGGACGTGAGAAACATAGCCATTGTTGCTCACGTTGACCATGGGAAAACCACTCTCGTTGATGCCATGCTCAAACAAACTAAGGTATTTCGTGATAATCAATTTGTTCAGGAAAGGATAATGGACTCGAATGATTTGGAGCGCGAAAGAGGAATTACAATACTGAGTAAAAATACATCTGTTACTTATAAAGATGCGAAGATTAATATAATAGATACTCCGGGTCACTCTGATTTTGGTGGTGAAGTGGAGCGCATCTTAAATATGGTGGAAGGGATCCTTCTAGTGGTAGATTCTGTTGAAGGGCCAATGCCACAGACAAGATTTGTCTTGAAGAAGGCTTTAGAGTTTGGTCACTCAGTTGTCGTGGTTGTGAATAAAATAGATAGGCCTTCTGCTCGCCCAGAATATGTCGTCAACTCTACTTTTGAACTCTTCATTGAACTAAATGCAACAGATGAACAGTGTGACTTTCAAGTAATATATGCAAGTGGTATAAAAGGGCATGCAGGGTTGACTCCTGAAAATCTGGCAGAAGACCTTGGCCCATTGTTTGAATCCATCATTAGATGCATCCCTGGACCACATATTGACAAAGATGGTGCCCTTCAAATGCTTGTTACAAATATTGAGTATGATGAACATAAAGGGCGTATAGCAATTGGGCGCGTGCAAGCTGGAGTCTTAGAAAAAGGCATGGATGTCCGAGTATGTACTTCAGATGATTCATGTAGATATGGAAGAGTTAGTGAGCTTTATGTGTATGACAAATTCAATAGGGTCCCTGCAGATAAGGTGGAGGCAGGTGATATATGTGCAGTTTGTGGAATTACTGATATTCAGATTGGGGAGACTATTGCTGATAAAGTATCTGGGAAGCCACTACCTTCCATCAAGGTGGAAGAACCGACAGTGAAAATGTCTTTCTCCATAAACACTTCACCTTTTGTTGGCCGTGAGGGAAAGTATGTTACTAGTAGGAATTTAAGGGACAGGCTTTATCGTGAACTTGAGCGGAATCTGGCTATGAAAGTCGAAGATGGTGAAACAGCTGATACATTTGTTGTCAGTGGGCGAGGAACTTTGCATATCACCATACTCATAGAAAATATGCGAAGAGAAGGATATGAATTCATGGTTGGGCCTCCCAAAGTTATCAACAAGAAGGTGAATGAACAACTGTTGGAGCCGTATGAGATTGCTACTGTGGAGGTACCAGAAGAGCACATGGGAGCTGTTGTTGAACTTCTCGGCAAGAGACGAGGACAGATGTTTGATATGCAAGGAGTTGGATCGGAAGGAACTACACTACTCAAATATAAGATCCCAACCCGTGGCCTTCTTGGTTTGCGGAACTCAATTTTAACTGCCTCCCGAGGGACAGCTATTCTCAACACTGTCTTTGATAGCTATGGGCCATGGGCTGGTGACATTAGTACTCGGGATCAAGGCTCATTGGTTGCTTTTGAGGATGGAACAAGTACTTCTTATGCAATCTCTAGTTCACAGGAGAGGGGACAGATGTTTATTGGTCCTGGAGTTGATGTTTATAAAGGTCAAATTGTTGGCATCCATCAGCGACCTGGGGACTTGTCCTTGAATGTTTGCAAGAAGAAAGCTGCAACCAACGTACGTTCCAACAAGGAACAAACAGTGATTCTTGATACGCCATTGGACTATAGTCTGGATGACTGCATTGAATACATCCAAGAAGATGAACTAGTAGAGGTCACCCCCGCAAGTATCCGAATGTGCAAGAATCCAAAAATTACAAACAAGAAAACAAGCTGCATAACTCATCAATGCTGTTGCTGCTAA 2058 0.4271 MEKMAALTTNIIHTPLLPNNTTLPKTSSFQPFFSNQLLGLPLSSSSSLTVAKRFSCRPIKCSVSEATEPKTEKKRQLLRRGDVRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVTYKDAKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHSVVVVVNKIDRPSARPEYVVNSTFELFIELNATDEQCDFQVIYASGIKGHAGLTPENLAEDLGPLFESIIRCIPGPHIDKDGALQMLVTNIEYDEHKGRIAIGRVQAGVLEKGMDVRVCTSDDSCRYGRVSELYVYDKFNRVPADKVEAGDICAVCGITDIQIGETIADKVSGKPLPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFVVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVNEQLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMQGVGSEGTTLLKYKIPTRGLLGLRNSILTASRGTAILNTVFDSYGPWAGDISTRDQGSLVAFEDGTSTSYAISSSQERGQMFIGPGVDVYKGQIVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPASIRMCKNPKITNKKTSCITHQCCCC 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01714 685 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 81 276 IPR000795 GO:0003924|GO:0005525
Gma02g01714 685 CDD TypA_BipA 82 275 - -
Gma02g01714 685 Pfam Elongation factor Tu domain 2 297 366 IPR004161 GO:0005525
Gma02g01714 685 SUPERFAMILY EF-G C-terminal domain-like 476 591 IPR035647 -
Gma02g01714 685 CDD BipA_TypA_II 283 376 - -
Gma02g01714 685 Pfam Elongation factor Tu GTP binding domain 83 273 IPR000795 GO:0003924|GO:0005525
Gma02g01714 685 SUPERFAMILY Translation proteins 229 376 IPR009000 -
Gma02g01714 685 PRINTS GTP-binding elongation factor signature 201 210 IPR000795 GO:0003924|GO:0005525
Gma02g01714 685 PRINTS GTP-binding elongation factor signature 85 98 IPR000795 GO:0003924|GO:0005525
Gma02g01714 685 PRINTS GTP-binding elongation factor signature 129 137 IPR000795 GO:0003924|GO:0005525
Gma02g01714 685 PRINTS GTP-binding elongation factor signature 149 159 IPR000795 GO:0003924|GO:0005525
Gma02g01714 685 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 83 674 IPR006298 GO:0005525
Gma02g01714 685 Gene3D - 467 560 - -
Gma02g01714 685 CDD BipA_TypA_C 476 555 IPR035651 -
Gma02g01714 685 Gene3D bipa protein 561 640 IPR042116 -
Gma02g01714 685 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 63 675 - -
Gma02g01714 685 SUPERFAMILY EF-G C-terminal domain-like 381 465 IPR035647 -
Gma02g01714 685 Gene3D Elongation Factor G (Translational Gtpase), domain 3 384 667 - -
Gma02g01714 685 TIGRFAM small_GTP: small GTP-binding protein domain 84 223 IPR005225 GO:0005525
Gma02g01714 685 Gene3D Translation factors 277 377 - -
Gma02g01714 685 Gene3D - 81 276 IPR027417 -
Gma02g01714 685 SMART EFG_C_a 473 562 IPR000640 -
Gma02g01714 685 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 122 137 IPR031157 -
Gma02g01714 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 284 IPR027417 -
Gma02g01714 685 CDD BipA_III 383 461 - -
Gma02g01714 685 Pfam Elongation factor G C-terminus 473 559 IPR000640 -
Gma02g01714 685 PANTHER BNAC09G43450D PROTEIN 63 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01714 Gma-Chr2 36595532 36603304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01714 83 210 Eukaryotic Initiation Factors Gene Family AT3G22980 44.615 1.08e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01714 K06207 - gmx:100785222 1321.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01714 02 36595532 36603304 Gma02g01714 02 36595532 36603304 ECH