Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01701 ATGGAAGGTTGCAAAATGTTTCCACCAAAGCCATGGAAGAAAGGCCCAACAAGGGGCAAAGGTGGCCCTCAAAACTCCTCATGTGAGTATAGAGGTGTTAGGCAAAGAACATGGGGCAAATGGGTGGCTGAGATAAGAGAGCCAAAGAAGAGAACAAGGCTCTGGCTTGGCTCTTTTGCCACAGCAGAAGAAGCTGCCTTGGCCTATGATGAGGCTGCAAGGAGACTCTATGGCCCTGATGCTTACCTTAACCTCCCCCACATGATGATGCAACCAACTATCTTCACAAATTCCACCGCCACCAAATCTCACAAGTACTTCAAGTGGTTCCCTTCCAAGAACTTCATTTCAATGTTTCCCTCAAGAGGTGGATTGCTCAACCTCAATGCTCAACCTAGTGTCCATGTCATCCATCAGAAGCTGCAAGAGCTTAAGCAAAATGGGGTGGTTGCAACAAGTCAAACTCAATCATCACCACATACTAGTTCATTGTCCACTCATCCAAAGGTGGTGGACCTTGAGAACTTTGACATCCAAAACCATGCAGAAATTCTTCCTCCACTGCAAGAGGGTAATTCTCGAGTTTCATCACAGAAAACTATTGTTGGTGATTTTGAGGAGAAGCCTCAGATTGACCTACTTGAGTTTCTTCAGCAGATGGGAATACTAAAGGAAGAAAGAGAGGAAGAGAAAACTAATAGCTCAGGAAGTTCAACAACAGTGTCTGAAGCTGCATCAAGAGATGAGAGCAGTGAACAAGCAGGAGTGTTTTCTGACATGAGTAGTGTTAACTGGGAGGAATTGATTGAGATGCATGAGCATGACCATGGAGTTGCAGATAGTTTTTATCGTGCATCAGAAGAAATCCAGTTTGAAGCATATGACATAAACGAGGACCTTACTTTCTCCCCTTCCATTTGGAACTATTAA 930 0.443 MEGCKMFPPKPWKKGPTRGKGGPQNSSCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAALAYDEAARRLYGPDAYLNLPHMMMQPTIFTNSTATKSHKYFKWFPSKNFISMFPSRGGLLNLNAQPSVHVIHQKLQELKQNGVVATSQTQSSPHTSSLSTHPKVVDLENFDIQNHAEILPPLQEGNSRVSSQKTIVGDFEEKPQIDLLEFLQQMGILKEEREEEKTNSSGSSTTVSEAASRDESSEQAGVFSDMSSVNWEELIEMHEHDHGVADSFYRASEEIQFEAYDINEDLTFSPSIWNY 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01701 309 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Gma02g01701 309 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Gma02g01701 309 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Gma02g01701 309 MobiDBLite consensus disorder prediction 148 167 - -
Gma02g01701 309 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Gma02g01701 309 MobiDBLite consensus disorder prediction 1 28 - -
Gma02g01701 309 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Gma02g01701 309 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Gma02g01701 309 MobiDBLite consensus disorder prediction 234 257 - -
Gma02g01701 309 MobiDBLite consensus disorder prediction 225 257 - -
Gma02g01701 309 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Gma02g01701 309 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Gma02g01701 309 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 1 306 - -
Gma02g01701 309 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F 1 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01701 Gma-Chr2 36290389 36291425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01701 10 309 AP2-EREBP Transcription Factor Family AT3G57600 48.675 3.17e-81 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma02g01701 AP2 2.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01701 - - gmx:100808363 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01701 02 36290389 36291425 Gma02g01701 02 36290389 36291425 ECH
Gma19g01339 19 42686031 42686879 Gma02g01701 02 36290389 36291425 PCT
Gma03g01284 03 38935826 38936680 Gma02g01701 02 36290389 36291425 PCT
Gma02g01701 02 36290389 36291425 Gma19g01339 19 42686031 42686879 PCT
Gma02g01701 02 36290389 36291425 Gma03g01284 03 38935826 38936680 PCT