Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01667 ATGAACGAGAACAGGATTGATTGTGTAGGACGGACTCAACAAAGCTATGGCCTAAATGGTGATTGGAATTCTGAGTTTGGCAATTGTTCTAGTCAATATTTTGATGTGAGACAGGCTTCAAATATGGGAACTTGCAATCAGCCACTTGCAATGGCCAGTGGTGGAGGAGTGGAACAGGAACCACACATAGGCCAAAACAAATCATCTAGCAGCATCATAAGCCGTTTCAAGTCTCCTGCTTCAGCCTTTTATGCAACAGAAATGTGCATGGGTGGTTTCCCTCAATATGATAGCCAAATTGGCAATCCATCTTTGATGTCTCATTCCTCCAAGTTTAATGATATGGAATTTCCTTTATATCAATCTCTCAGGCAAAGCCTATTCATGCCTTCATTAGCAAACCAACCTCCCCCCAAATTTGACTTGTCAAATCCCTTGCAAGAAATGCTCAAATTTCATTTGAATAGTGATCAATGTGTTAGATCTCTTGAAACATTTAATAAAATCCCATGTGGGGATTTTCCTGGCAGCAATTTTCTTCCAATTGAACAACATAAGTTATTCATTGATGATGCTGCCCCAATTAGTAGAAGCCCTTCAATTCCTTCTAAGGGAAATCAGGGTCAAACAGTTTCTTGTGGCTCATTCAATTTGCCTTCTGCACAGCTTAGTTTTTCTTCTCAGCAAGAGATGCTGTCTCCAACAGGTAGCATGCCAACTAATTCTGGAAACTCTAGTTCAAATGGATCAGTAGTTTCAAGTAAAACAAGAATAAGATGGACTCAGGAGCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTCGGAGGTGCTGAGACAACACCAAAAGCTATATTAAGGCTGATGGATTCAGATGGATTGACCATCTTCCAAGTTAAAAGTCATTTGCAGAAATATAGAATTGCCAAATTCATGCCACAGCCAACTCAAGGGAAATCTGACAAAAGAACCAATGCAGAGAATGTGCATCTTGATGTCAAAACTGGCTTCCAAATTAGAGAGGCACTTCAGTTGCAGTTAGATGTTCAGCGGCGTCTTCATGAACAGCTAGAGATTCAGAGAAAATTACAGTTGAGGATTGAGGAGCAAGGTAAGCAGCTGAAGATGATGTTTGACCAACAGCAGAAGACAACTGATAGCCACTTGATTACTGAGAATAGTGATAGACCAATTAGTTCTAAAGATGTTCTGGTTTCCATTTATGAAGGGTCTGAAAATTCCTTGTTCTCTTCCAAGATAAGTTAG 1266 0.4013 MNENRIDCVGRTQQSYGLNGDWNSEFGNCSSQYFDVRQASNMGTCNQPLAMASGGGVEQEPHIGQNKSSSSIISRFKSPASAFYATEMCMGGFPQYDSQIGNPSLMSHSSKFNDMEFPLYQSLRQSLFMPSLANQPPPKFDLSNPLQEMLKFHLNSDQCVRSLETFNKIPCGDFPGSNFLPIEQHKLFIDDAAPISRSPSIPSKGNQGQTVSCGSFNLPSAQLSFSSQQEMLSPTGSMPTNSGNSSSNGSVVSSKTRIRWTQELHEKFVECVNRLGGAETTPKAILRLMDSDGLTIFQVKSHLQKYRIAKFMPQPTQGKSDKRTNAENVHLDVKTGFQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDQQQKTTDSHLITENSDRPISSKDVLVSIYEGSENSLFSSKIS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01667 421 Pfam MYB-CC type transfactor, LHEQLE motif 338 384 IPR025756 -
Gma02g01667 421 Gene3D - 254 312 - -
Gma02g01667 421 MobiDBLite consensus disorder prediction 227 254 - -
Gma02g01667 421 Pfam Myb-like DNA-binding domain 259 307 IPR001005 -
Gma02g01667 421 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 51 421 - -
Gma02g01667 421 SUPERFAMILY Homeodomain-like 253 308 IPR009057 -
Gma02g01667 421 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 255 309 IPR006447 GO:0003677
Gma02g01667 421 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 51 421 IPR044848 GO:0003700
Gma02g01667 421 Coils Coil 340 360 - -
Gma02g01667 421 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 254 311 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01667 Gma-Chr2 35017994 35021029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01667 245 403 G2-like Transcription Factor Family AT4G28610 52.326 2.70e-47 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma02g01667 Myb_DNA-binding 2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01667 - - gmx:100780919 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01667 02 35017994 35021029 Gma02g01667 02 35017994 35021029 ECH