Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01654 ATGTTCGCCATGGATGAATCACCGGCGAACAGGGAGGGCAAAAACAGAGCACAGGGAAACGAGGAACAAGAAGATGATGACTACATGGGTGACCTTTCTCAGTTTCTTCCTTCCGATGCTCTCTTCCCTCCCAAGTTGTTTTCATCCAAAAAGATTTCCAGCAAGAAAGATCCTTCAGTCAATTCTTCCAAGAACCGGTTGAAAACTCATAGCTGGCAAGAACGGAGAAAACTTGAAAGAGAAAGGAAGCAACAAGAAGAGGATGAGCAAACATTAGCGAAAGTTGAAGCTCCAATAGCACAATCCAACATTGGGTTTAAGCTTCTCAAACAGATGGGTTACACTCCAGGTTCTGCGCTTGGCAAGCAGGGCTCGGGCAGGGCCGAACCAGTGGGGATTGAAATTCGACGGTCACGAGCTGGTGTAGGCTTAGAAGATCCCCACAAGGAGAAGAGGAAAAATGAGGGAATCATGATGGACAGGAAAAGGAGGAAAGAGGAGGACCTAATGAAAGAATTTGGGTCCAGGCAAAAGTCACAGTGGCAGAGTAGGAGAGTTATAATTAATTACAATAAGGCAAAGGCTGCCCTTGATCAATTGGAGAATAGGGAAATTGTGGAGCCACAAAAGAATGACGATGACGCAGAGGGTGAAGAAGAAGAAGAGGAAGAAATAACTGAAGAGGACTTGCACGATGTTTTGATGAAACTGAGGGATGAATTTAATTATTGCCTCTTTTGTGGATGCCAATACGAATCGAGTGATGTCCTCTTGGGCAACTGCCCTGGAACCAACGAAGATGACCACTAA 810 0.4531 MFAMDESPANREGKNRAQGNEEQEDDDYMGDLSQFLPSDALFPPKLFSSKKISSKKDPSVNSSKNRLKTHSWQERRKLERERKQQEEDEQTLAKVEAPIAQSNIGFKLLKQMGYTPGSALGKQGSGRAEPVGIEIRRSRAGVGLEDPHKEKRKNEGIMMDRKRRKEEDLMKEFGSRQKSQWQSRRVIINYNKAKAALDQLENREIVEPQKNDDDAEGEEEEEEEITEEDLHDVLMKLRDEFNYCLFCGCQYESSDVLLGNCPGTNEDDH 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01654 269 MobiDBLite consensus disorder prediction 1 94 - -
Gma02g01654 269 MobiDBLite consensus disorder prediction 9 23 - -
Gma02g01654 269 MobiDBLite consensus disorder prediction 53 67 - -
Gma02g01654 269 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 24 269 - -
Gma02g01654 269 MobiDBLite consensus disorder prediction 138 163 - -
Gma02g01654 269 SMART G-patch_5 99 145 IPR000467 GO:0003676
Gma02g01654 269 MobiDBLite consensus disorder prediction 203 227 - -
Gma02g01654 269 Coils Coil 183 203 - -
Gma02g01654 269 Pfam G-patch domain 101 144 IPR000467 GO:0003676
Gma02g01654 269 Coils Coil 75 95 - -
Gma02g01654 269 MobiDBLite consensus disorder prediction 211 227 - -
Gma02g01654 269 ProSiteProfiles G-patch domain profile. 101 147 IPR000467 GO:0003676
Gma02g01654 269 MobiDBLite consensus disorder prediction 139 163 - -
Gma02g01654 269 PANTHER UNCHARACTERIZED 24 269 IPR039249 -
Gma02g01654 269 SMART DUF4187_2 215 269 IPR025239 -
Gma02g01654 269 MobiDBLite consensus disorder prediction 68 93 - -
Gma02g01654 269 Pfam Domain of unknown function (DUF4187) 218 269 IPR025239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01654 Gma-Chr2 34426945 34429836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01654 93 143 C2H2 Transcription Factor Family AT5G26610 45.098 5.52e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01654 - - gmx:100777380 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g01654 02 34426945 34429836 Gma02g01654 02 34426945 34429836 ECH