Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01649 ATGGCTTCTTCAAGTGTTAAGGGAAATACCAACTCAACAACAACTCAAATTGAACCACTCCCCCCACCTTTACATCTTCATCATCAACCACCACAACATCATTTTCATCATCATCAAATACCAGACCAACAAATTTCTTTTGGAATGTTGCCATCTTCCTCGTCAGCCTCTATCCCAGGAAATTTCTTAAGCAAAGATTCTGGAGCTTATGATTTGGGGGAATTGGATCAAGCCTTTTTTTTGTATCTTGATGGTCAGGCTGACCCTTCTAGTGTTCAAGACCAAAAACAGAACTCATCATCAGGAATGAGGCCACCACCAACTCTCAACATTTTCCCATCTCAGCCTATGCACGCAGTGCCACCATCCAATTCCAAGGTTAACATGGGATTACCCTCCACACAAACCAGTACTGGCTCAAAGAGACAGCCAGAGACATCCATGGCCAAGCCCAAACCACACACCGAAGCCGCCGCTGCACCTGAGCCACCCAAAGCTGTAAAGCGAGAGGGCAATCTCAAGGGAACAACATCAAGTTCTGAGCAGGAAGCACCCAAAACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCAAGGAAAAGCAGGCTCAGGAAAAAGGCGTACGTTCAGCAACTAGAGTCGAGTAGGATTAAGCTTAATCAGATAGAACAAGAGTTACAACGTGCTAGAGCTCAAGGCATATTAATGGGTGGTGGAAATGCACTTCTGGGAGGGGAGCAAGGCTTTCCTATGGCAATGAGTGGCATTAGCTCAGAGGCTGCAATATTTGACGTGGAATATGCGAGATGGTTAGAGGAGCACCACCGCATAGTGTGCGAGCTAAGAGCTGTACTCCAAGAACACCTTCACGAAAACGAGCTTCGTTTATATGTGGACAATTGCTTGGCTCACTATGACCAAGTAATGAACCTGAAGAGCATGGTGGCCAAAACCGACGTATTCCACCTTGTTTTTGGCGTGTGGAAGACCCCAGCCGAACGTTGCTTTATGTGGATTGGTGGCTTCAGGCCATCTGAACTCATCAAGATAATTCTGGGTCAAATTGAGCCTCTTACGGAGCAACAAATACTTGGGATATGTGGGTTGCAACAATCTACACAAGAGGCAGAAGAGGCTCTTTCCCAAGGGCTTGATGCTCTTAATCAATCTCTCTCAGAGACTATAACATCAGACTCTCTGTGGTGTCCTCCAAATATGACTAACTACATGGGACAAATGGCTGTGGCAATCAACAAACTCTCCACCCTTGAAAGCTTTGTGAGACAGGCTGATAATCTGAGGCACCAGACAATTCACCGTCTCCACCAACTTCTAACAACACGCCAAGCCGCGAGGTGTTTGGTGGCAATTTCTGAGTACTTCCATCGTCTCAGAGCCCTGAGTTCTCTGTGGTCAACTCGTCCTCGCCAAGATCAGTAG 1455 0.466 MASSSVKGNTNSTTTQIEPLPPPLHLHHQPPQHHFHHHQIPDQQISFGMLPSSSSASIPGNFLSKDSGAYDLGELDQAFFLYLDGQADPSSVQDQKQNSSSGMRPPPTLNIFPSQPMHAVPPSNSKVNMGLPSTQTSTGSKRQPETSMAKPKPHTEAAAAPEPPKAVKREGNLKGTTSSSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQIEQELQRARAQGILMGGGNALLGGEQGFPMAMSGISSEAAIFDVEYARWLEEHHRIVCELRAVLQEHLHENELRLYVDNCLAHYDQVMNLKSMVAKTDVFHLVFGVWKTPAERCFMWIGGFRPSELIKIILGQIEPLTEQQILGICGLQQSTQEAEEALSQGLDALNQSLSETITSDSLWCPPNMTNYMGQMAVAINKLSTLESFVRQADNLRHQTIHRLHQLLTTRQAARCLVAISEYFHRLRALSSLWSTRPRQDQ 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01649 484 CDD bZIP_HBP1b-like 191 243 - -
Gma02g01649 484 SMART brlzneu 187 240 IPR004827 GO:0003700|GO:0006355
Gma02g01649 484 Pfam bZIP transcription factor 191 222 IPR004827 GO:0003700|GO:0006355
Gma02g01649 484 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 194 209 IPR004827 GO:0003700|GO:0006355
Gma02g01649 484 Gene3D - 190 240 - -
Gma02g01649 484 MobiDBLite consensus disorder prediction 172 186 - -
Gma02g01649 484 Pfam Seed dormancy control 283 356 IPR025422 GO:0006351|GO:0043565
Gma02g01649 484 ProSiteProfiles DOG1 domain profile. 265 479 IPR025422 GO:0006351|GO:0043565
Gma02g01649 484 Coils Coil 210 237 - -
Gma02g01649 484 MobiDBLite consensus disorder prediction 1 19 - -
Gma02g01649 484 PANTHER TRANSCRIPTION FACTOR TGA9 80 482 - -
Gma02g01649 484 SUPERFAMILY Leucine zipper domain 191 233 IPR046347 GO:0003700|GO:0006355
Gma02g01649 484 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 80 482 - -
Gma02g01649 484 MobiDBLite consensus disorder prediction 88 194 - -
Gma02g01649 484 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 189 233 IPR004827 GO:0003700|GO:0006355
Gma02g01649 484 MobiDBLite consensus disorder prediction 117 145 - -
Gma02g01649 484 MobiDBLite consensus disorder prediction 88 108 - -
Gma02g01649 484 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01649 Gma-Chr2 34194365 34202492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01649 60 483 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.387 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma02g01649 DOG1 6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01649 K14431 - gmx:100776311 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01368 19 42971459 42978211 Gma02g01649 02 34194365 34202492 PCT
Gma03g01307 03 39238086 39246234 Gma02g01649 02 34194365 34202492 PCT
Gma02g01649 02 34194365 34202492 Gma19g01368 19 42971459 42978211 PCT
Gma02g01649 02 34194365 34202492 Gma03g01307 03 39238086 39246234 PCT