Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01633 ATGGATTCCCATATCCATCATCATCAAAGTTACCAACAACAGAACCAACCCTCTTCTGGGTTGCTTCGTTTTCGCTCTGCGCCTAGCTCTCTTCTTTCAAATCTCACACCTTCTTTTGTGAGTGAAGACTTTGGTTCTAGCAGCTTCAGAGAGTTGGAAGGAAACAACAACAAGGGTTGTTCTAAGGATTTGAGTTCGATGAATTCGCATAAGGGGGTTTATGGTGGGGGGTTGCCACCTCACTATCCAAGGCATGGTTCTTCTTCTTCTACTTCGAGTTCTGCTATGGAAGGGTCTTATGGGATGGTGAGTTCAATGGGATTGGATCATGAAGCGCCGCATAAGGGGTTTGGGTCAAGTCTTCTCAGGCAGAGTAGCTCCCCTGCTGGCCTTTTCTCCAATAACAACATTTCCTTTCAAAATGGGTTTGCCACCATGAAAGGTGTTGGAAACTATGGTGCGGTGAATGGAAGTAATGGTGAACTTAGTCCATGCATTAACAGATTGAAGAACCAGGTTAGCTTCTCACCAAGAAATGCTTCTTCCCTGGGAATGTTGTCGCAGATCTCTGAATTAGGGAGTGAAGACATTGAGGCAACTAGTCCTGATGATGATACTAAACATGGAGGTAATGATACTCAACATTATGGCCCCGGATTCCCCTTTGGTTCTTGGAATGATACTCCACAACTCTCAGAAAATATCAGTGGCTTGAAAAGAGGGAGAAGTGGCAATGAAAAGATGTTTTCTGATGTTCAGAATGGAGAGCTAGCAAACCAAGTTAATATGTTATCACATCACTTGAGTTTACCAAAAACTTCAGCAGAGATGATTACTATGGAGAAGTTGCTTCAGTTCCCTGATTCTGTTCCTTGTAAAATCAGAGCAAAGCGAGGCTGTGCTACTCATCCTCGAAGCATTGCTGAAAGGGTGAGAAGAACTCGGATCAGTGAAAGAATGAGGAAATTACAAGAGCTTGTCCCACACATGGATAAGCAAACCAACACAGCAGACATGTTGGACTTGGCTGTTGAATACATTAAAGATCTTCAGAAACAATTCAAGACTCTAAGTGAAAAAAGGGCAAACTGCAAGTGTATAAGCATGCCAAAGGCAGATACAAATCAAATTGCTTGA 1137 0.4292 MDSHIHHHQSYQQQNQPSSGLLRFRSAPSSLLSNLTPSFVSEDFGSSSFRELEGNNNKGCSKDLSSMNSHKGVYGGGLPPHYPRHGSSSSTSSSAMEGSYGMVSSMGLDHEAPHKGFGSSLLRQSSSPAGLFSNNNISFQNGFATMKGVGNYGAVNGSNGELSPCINRLKNQVSFSPRNASSLGMLSQISELGSEDIEATSPDDDTKHGGNDTQHYGPGFPFGSWNDTPQLSENISGLKRGRSGNEKMFSDVQNGELANQVNMLSHHLSLPKTSAEMITMEKLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTADMLDLAVEYIKDLQKQFKTLSEKRANCKCISMPKADTNQIA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01633 378 MobiDBLite consensus disorder prediction 197 228 - -
Gma02g01633 378 PANTHER TRANSCRIPTION FACTOR BHLH130 13 370 - -
Gma02g01633 378 Pfam Helix-loop-helix DNA-binding domain 305 351 IPR011598 GO:0046983
Gma02g01633 378 SMART finulus 306 356 IPR011598 GO:0046983
Gma02g01633 378 MobiDBLite consensus disorder prediction 1 22 - -
Gma02g01633 378 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 13 370 - -
Gma02g01633 378 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 300 350 IPR011598 GO:0046983
Gma02g01633 378 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 303 365 IPR036638 GO:0046983
Gma02g01633 378 MobiDBLite consensus disorder prediction 8 22 - -
Gma02g01633 378 Gene3D - 301 369 IPR036638 GO:0046983
Gma02g01633 378 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01633 Gma-Chr2 33631892 33635597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01633 1 356 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 45.431 7.38e-84 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma02g01633 HLH 4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01633 - - gmx:100819605 744.577