Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01629 ATGCCAGGTCATCATCTCCACCTTTCTTTGTTCTTCTTCCTCATTTCCCTTCCCCTCACACTCCCCCTAAACTCCGACGGGCTCTCATTGCTAGCCTTCAAAGCCGCAATCTCAGTGGACCCCACAGGAGCCCTAGCCACCTGGACCGACACCTCCCTCACCCCCTGCACCTGGGCCGGAGTAACCTGCAAGCACAACCACGTAACCCAACTAACCCTCCCTTCAAAAGCCCTAACGGGCTACCTCCCTTCAGAACTGGGCTTTTTAGCCCACCTAAAACGCCTCTCCCTCCCCCACAACAACCTCTCCCACGCAATCCCCACCACCCTCTTCAATGCCACCACCCTCCTCGTCCTCGATCTCTCCCACAACGCCCTCACTGGCCCACTCCCCGCATCACTCTCCTCTCTCAAACGCCTCGTCCGCTTGGACCTCTCTTCGAACCTCCTCTCCGGTCACCTTCCGGTCACTCTCTCCAACCTCCCTTCCCTGGCGGGCACGCTCAACTTATCACACAACCGCTTCACCGGCAACATTCCGTCCTCCCTCGGGTCCCTCCCGGTCACCATCAGCCTCGACCTCCGGTACAATAATTTAACCGGCGAAATCCCCCAGGTCGGGTCGTTACTTAATCAGGGCCCCACTGCTTTCTCCAACAACCCCTACCTCTGCGGGTTCCCCTTGCAAAACGCGTGCCCGGAGAATCCGAAAGTTCCCACCACGAAACAAAGACAAAACCCGAACAGGGATCTACAAACTGGGGAACAGAACCCGAGAGGTGGCGGGCTTTTTGTGTGTGTGGTTGCGATGGTGGTGATATCTGGAATTTTGTTATGTTTTGCGGTGGTTTTTATGATTCTGCGGCGAGGGAGGTGTGGCGACGAGGGGCAATTTGGGAAAGTGGAGGGTGGAAATGTGGGGTGTGTGGATGATGTGAAGGGGAGGTTTGTGGTGGTGGAGGAAGAGGGAGGGGTGTTGGGAGGGATGGAGTTGGAGGATCTGTTGAGGGGTTCGGCGTACGTGGTGGGGAAGAGTAGGAGTGGGATTGTGTACAAGGTTGTCGGGGTTGGGAAAGGTGCGGCGGCGGCCAGGGTGGTGGCGGTGAGGAGGCTCGGCGAGGGCGGTGCCGCATGGCGGTTGAAGGAGTTTGAGGCGGAGGTGGAGGGTGTGGCGAGGGTGAGGCACCCCAATGTGGTGGCTCTGAGAGCTTATTACTATGCCAGGGAGGAGAAGCTGCTCGTCACGGATTTCGTCCGCAACGGGAACTTGCACACCGCATTGCATGGTGGACCTTCCAATTCATTTTCACCATTACCATGGGCAGCAAGGTTAAAAATTGCTCAAGGAGCAGCAAGAGGCTTAACATACATACACGAGTTCAGTGGTAGAAAATATGTCCATGGCAACCTTAAATCAACAAAAATCCTTCTGGACGAGGATCATAGTCCTTACATATCCGGTTTCGGACTTACCCGTCTTGGCATAGGTAGCTCAAACTCAAAGTCTCTATCATCAGAACCAAAACGTTCAAACCACTCTATAGCAACATCAGCAATTGTTTCAATTGGTTCAAATGTTTCAACTTCCTCTAACATCTACTTGGCACCCGAGGCGCGCATAGCTGGTGGAAAGTTCACTCAGAAATGTGATGTGTATTCTTTTGGTATAGTGCTATTAGAACTTTTGACAGGTAGACTTCCAGATTTAGGAGCTGAAAATGATGGCATGGGGCTAGAGAGTTTTGTGAGAAAAGCATTCAGGGAGGAACAGCCCTTGTCGGAGATTATAGACCCTGCACTTCTGCCTGAGGTTTATGCTAAGAAGCAAGTTATTGCAGTGTTTCATGTTGCACTGAACTGCACAGAACTTGATCCAGAATTGCGACCAAGAATGAGAACCGTGTCAGAGACCCTAGATCGAATCAAATTACAGTGA 1935 0.5282 MPGHHLHLSLFFFLISLPLTLPLNSDGLSLLAFKAAISVDPTGALATWTDTSLTPCTWAGVTCKHNHVTQLTLPSKALTGYLPSELGFLAHLKRLSLPHNNLSHAIPTTLFNATTLLVLDLSHNALTGPLPASLSSLKRLVRLDLSSNLLSGHLPVTLSNLPSLAGTLNLSHNRFTGNIPSSLGSLPVTISLDLRYNNLTGEIPQVGSLLNQGPTAFSNNPYLCGFPLQNACPENPKVPTTKQRQNPNRDLQTGEQNPRGGGLFVCVVAMVVISGILLCFAVVFMILRRGRCGDEGQFGKVEGGNVGCVDDVKGRFVVVEEEGGVLGGMELEDLLRGSAYVVGKSRSGIVYKVVGVGKGAAAARVVAVRRLGEGGAAWRLKEFEAEVEGVARVRHPNVVALRAYYYAREEKLLVTDFVRNGNLHTALHGGPSNSFSPLPWAARLKIAQGAARGLTYIHEFSGRKYVHGNLKSTKILLDEDHSPYISGFGLTRLGIGSSNSKSLSSEPKRSNHSIATSAIVSIGSNVSTSSNIYLAPEARIAGGKFTQKCDVYSFGIVLLELLTGRLPDLGAENDGMGLESFVRKAFREEQPLSEIIDPALLPEVYAKKQVIAVFHVALNCTELDPELRPRMRTVSETLDRIKLQ 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01629 644 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 9 644 - -
Gma02g01629 644 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Gma02g01629 644 Pfam Protein tyrosine and serine/threonine kinase 342 638 IPR001245 GO:0004672|GO:0006468
Gma02g01629 644 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 644 - -
Gma02g01629 644 Gene3D Phosphorylase Kinase; domain 1 337 417 - -
Gma02g01629 644 ProSiteProfiles Protein kinase domain profile. 336 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma02g01629 644 Gene3D Ribonuclease Inhibitor 166 234 IPR032675 -
Gma02g01629 644 Gene3D Ribonuclease Inhibitor 23 165 IPR032675 -
Gma02g01629 644 SUPERFAMILY Protein kinase-like (PK-like) 341 638 IPR011009 -
Gma02g01629 644 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515
Gma02g01629 644 SUPERFAMILY L domain-like 25 229 - -
Gma02g01629 644 MobiDBLite consensus disorder prediction 235 255 - -
Gma02g01629 644 Gene3D Transferase(Phosphotransferase) domain 1 418 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01629 Gma-Chr2 33416691 33420727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01629 23 642 Receptor kinase-like Gene Family AT3G57830 53.014 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma02g01629 PK_Tyr_Ser-Thr 5.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01629 - - gmx:100806058 1191.41