Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma02g01595 ATGTCCCGAATCAAATTCAGGGTTTCATTGGTTTCTAGAGTTGCCATTAAGCCAAGTGGGACATCCAATTGGTTGGATTTAAATTATTCAGAGGATATATTATCTATTGTTGAACACGTTCACTATGGTTCACCCAGACACAATTCAATTCGGCGAGGAAAGGAGGGTTCCGCCGTCATCGCTATTGCCCTCCTCGATGCTCTTCCTCCTCTAAGGTTCCTTAGCCGTCATCGCCGATGCCATCATACCATACATGTAACGTGCTTCATCTTCACTTCTTTTTGTTCTTCTTCTTCTTCGTTTTGTTTCTGCCAATTTCGATGTCGGAAATTCCTATTACCTCCAGCTATGCTTCCACCTTTTCTTATTCTGCTGCGTATGCTCTTCATGAGAAAGACACGACACGGCGATGAAGACGGAGAACAATGGTGGTTCTTCTACACACGTGCGAGAGTGCATCACCATCATCTGTGCTTGCAGGTTTTCTGTGTGGGTCTCTGGTGTTTGGATGAATATTGGTATTATAGTTTGTTCACTCTATTTATGCTGTTTATGTTTGAGTCAACCATGGCAAAAAGTCGGTTGAAAACTCTAACTGAGTTAAGACGTGTTAGAGTGGATAGTCAGATCCTAATGGTACATCGCTATGGCAAGTGGGTAAAACTCTCTGGTACAGAGCTTTTGCCTGAGGATGTTGTCTCCATAGGTCGCTCTTCTGGTCAGAATGGGGAGGAGAAGTCTGTACCAGCAGACATGCTTCTATTGGCTGGAAGTGTGATTGTGAATGAAGCTATTCTAACAGGCGAGTCTACCCCTCAATGGAAGATTTCAATTGCGGGTAGGGGGATGGAGGAGACATTGTCAGCAAGGCAAGATAAAAACCATGTGTTATTTGGTGGAACAAAAATATTGCAGCACACTCCAGATAAGAGTTTTCCTCTAAAAACACCTGATGGTGGCTGCTTGGTTGTTATCTTGAGAACGGGGTTTGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCTACGGAAAGGGTGACTGCTAATAGCTGGGAAAGTGGATTCTTCATTTTATTCCTGGTTGTATTTGCTCTTATTGCTGCTGGTTATGTGCTTGTTAAGGGGCTAGAAGATCCCACAAGGAGCAAGTATAAACTTATACTAAGTTGTTCACTTATTGTTACTTCTGTGATTCCTCCTGAGTTACCAATGGAATTATCAATAGCTGCTAATACTTCCCTGATTGCACTGGCATGGCGTGGCATTTTTTGCACAGAGCCTTTTCGAATACCATTTGCTGGAAAGtgttgggatccctccttaattcgagagAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAGCTGTCTCTCAAAGGCTTATGTAGCGCCTGTGGAGTTTGCTGGTTCAGGGTTGCTTGCGATTGCATTTGTTAGCTTGTCTTCCCCAGACCAAGGGATAAGAAGATTAGCGTATGGCACTCTTGATAAATTTAAGAATGCAGTAGAGAAGTGCCAAAAGAGGAAGGATGTAATGGGACTTCGGCTTCTATTAAATTCTGTTCAAAACAGCATAGAAGAGCCATGGCAAAGAATCCCATCAGTTATTGCTTTATTTGCTGCAGAGGCATCTTGTGTATTGTTAGATCCGGCACATGATCATTATGCAGCTATAAGTACATTTTTTATACATTCATCTAAGTTGAATATGAGGGTTATGTTTGATAACTTTTTTTGGAGTACCTCTGTCAATTTCAAAGCAGAGAGGTCTTGGATGCTTTGCCTAATTGAGTCTAAGAACCTGATTATTGAGGTGATAAATAAATCTGTTAAATTGCATAAAATTACCCGTCATCTAGTGAAGCATTGTTCTTTATTTTCATGGTTTTCGTCTCTCATCTCCGTTGCCAGACAGAGGCTTAATGGAAATGAAAATAAACTTTTCTTAAAGCATGTGTTGGTAGCATTGAAGCCCATGATGCCTTCAACACCTTCTTTAGTGAAACCAGATTCAACAAGCACATCCTGCGCATCGTCTTTATCGATCTCGAACCCATCGTCATCAACGAAGTCCACTGCAGCACCTACCATCAACTCTTCCACCGCAAACAAGGAAGATGCCGCCAACAACTTCGCCAAAGGCCACTACACCGACTTCTACCAGCCGTTCAAGGAAGATGAATTTGAACAGAGCACTGAAGTTCAAATAATATTTCTAGCAGAGCCAAAGCCGGTTTTCTATGAGTTTGATTGGGAATTCGATGAACTTGAAGTATTGAATTATTTCTCTAATGTTTCGGATGTTAGATAA 2328 0.4111 MSRIKFRVSLVSRVAIKPSGTSNWLDLNYSEDILSIVEHVHYGSPRHNSIRRGKEGSAVIAIALLDALPPLRFLSRHRRCHHTIHVTCFIFTSFCSSSSSFCFCQFRCRKFLLPPAMLPPFLILLRMLFMRKTRHGDEDGEQWWFFYTRARVHHHHLCLQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDSQILMVHRYGKWVKLSGTELLPEDVVSIGRSSGQNGEEKSVPADMLLLAGSVIVNEAILTGESTPQWKISIAGRGMEETLSARQDKNHVLFGGTKILQHTPDKSFPLKTPDGGCLVVILRTGFETSQGKLMRTILFSTERVTANSWESGFFILFLVVFALIAAGYVLVKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAANTSLIALAWRGIFCTEPFRIPFAGKCWDPSLIREKSWLLAMHWYLLRISCLSKAYVAPVEFAGSGLLAIAFVSLSSPDQGIRRLAYGTLDKFKNAVEKCQKRKDVMGLRLLLNSVQNSIEEPWQRIPSVIALFAAEASCVLLDPAHDHYAAISTFFIHSSKLNMRVMFDNFFWSTSVNFKAERSWMLCLIESKNLIIEVINKSVKLHKITRHLVKHCSLFSWFSSLISVARQRLNGNENKLFLKHVLVALKPMMPSTPSLVKPDSTSTSCASSLSISNPSSSTKSTAAPTINSSTANKEDAANNFAKGHYTDFYQPFKEDEFEQSTEVQIIFLAEPKPVFYEFDWEFDELEVLNYFSNVSDVR 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma02g01595 775 MobiDBLite consensus disorder prediction 683 710 - -
Gma02g01595 775 SUPERFAMILY Calcium ATPase, transduction domain A 209 341 IPR008250 -
Gma02g01595 775 PANTHER CATION-TRANSPORTING ATPASE-RELATED 156 438 - -
Gma02g01595 775 Pfam Nucleolar pre-ribosomal-associated protein 1 479 602 IPR032436 -
Gma02g01595 775 Pfam E1-E2 ATPase 212 419 - -
Gma02g01595 775 Gene3D - 180 342 - -
Gma02g01595 775 PANTHER CATION-TRANSPORTING ATPASE 156 438 - -
Gma02g01595 775 SUPERFAMILY Calcium ATPase, transmembrane domain M 142 436 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma02g01595 Gma-Chr2 32417252 32432188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma02g01595 159 440 Primary Pumps ATPases AT5G23630 82.578 3.36e-158 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma02g01595 K14950 - gmx:100789385 534.643